Hemitrygon akajei (red stingray): 140719886 Help Entry 140719886         CDS       T11019                                  Symbol skic2 Name (RefSeq) superkiller complex protein 2   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism haka  Hemitrygon akajei (red stingray) Pathway haka03018   RNA degradation Brite KEGG Orthology (KO) [BR:haka00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     140719886 (skic2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:haka03019]     140719886 (skic2) Enzymes [BR:haka01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      140719886 (skic2) Messenger RNA biogenesis [BR:haka03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      140719886 (skic2)   mRNA degradation factors    3'-5' decay     Ski complex      140719886 (skic2) SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD MTR4-like_stalk Helicase_C DEXQc_Suv3 ResIII PhoU_div Motif Other DBs NCBI-GeneID:  140719886 NCBI-ProteinID:  XP_072890914 LinkDB All DBs Position 2:197133954..197244335 Genome browser AA seq 1249 aa AA seqDB search MERERLEVPPRDAHDLPLSILEVGCCGKFELVTQPVEKGSVLPLTTLPHGLPPFAVDLLT EAEMCFLSDPEKLPIHHFENSQKIWPRGKCVDALYHVDVTPAQSTLQVERKPTTGELLGY REVFLSDSGLSAKNSLSLQRPPGPLAESVRGSSTNYPFWPGGMDEPSLDMIQTDDALDED IDFENNLLTVPPGWKKGLDFKQAGPKAVPGLLSLTELMEVMDVYQLGCSSDEEEEERNRG TAEGKLPLARTNSLEELVLQKVSTPPPAAGSKKEEEVVLEKEQWAVPVDVSAPVDDFYKR IPEPAFKWPFEPDVFQKQAILRLESRDSVFVAAHTSAGKTVVAEYAIALSQKHMTRTIYT SPIKALSNQKFRDFKNTFKDVGLLTGDVQLHPDASCLIMTTEILRSMLYNGSDLIRDLEW VIFDEVHYVNDAERGVVWEEVLIMLPDHVNLILLSATVPNTLEFADWIGRIKQKKIYVIS TTKRPVPLEHYLYTGNSQKTQNEIFLLMDAQGNFLTKGYYAAVDAKKERASKHSQTFGAK QPTHYGGPSQDKSVWLSLIDVLRKKDNLPVVAFTFSRNRCDENANMLTTVDLTSAVEKSE IHVFFQKCISRLKGTDRELPQVLRMVQLLKRGIGVHHSGILPILKEVIEMLFARGLVKIL FATETFAMGVNMPARTVVFDSIRKHDGTNFRDLMPGEYIQMAGRAGRRGLDTTGMVIILC KTGVHEMADLHRMMLGKPMLLQSQFRLTYTMILNLLRVEALRVEDVMKRSFSEFHTRKDA KIYEQRVQDLTKKLANVDVECVGQLSDLEHYYITVRELLYTRTSLQKKVMESTSGVKALS AGRVVVVKNQQHRNALGVILQVSGDSSNRSFTTLVLCDSRGGEEQEEEREGGVDSSTAPT PDQLLANKLFLPEGPCGHTVVKLSLADISSITVKTLRINTDKIIDDFKKRQVPRFRNDPP GPSVTTATQELLRLAEGSPGGIASLDPVSDLQLKDLDLVEGYSRARQLEGSLGTFTCVHS PKFTTEYMRMQQRMLMKEELERLRFLLSDQSLVLLPEYQQRVEVLKRLRYIDNSCAVQLK GRVACEISNHELIVTEMVLENVLTELRPEEIVALLSCLVFQQKTQVEPELSETLQRGVDR IRGVAERIATLQRECGLRESVEDFVDQLKFGLVEVVYEWARGLPFAEITTLTDVQEGIIV RCIQRLNETCRDVRNAARIIGDPTLHAKMEQASNLIKRDIVFAASLYTQ NT seq 3750 nt NT seq  +upstreamnt  +downstreamnt atggagcgggagagactcgaagtccctccgcgagatgcccacgatctgcccttgtctatt ctcgaggtgggctgctgcgggaagtttgaactggtcacgcagccggtggaaaagggctct gtcctcccgctgaccacgcttccacatggcctgccgcccttcgcagtggacctcctcacc gaggcagagatgtgcttcctgtccgaccccgagaagctccccatccatcactttgagaac tcccagaagatatggccgagagggaaatgtgtggatgctttgtaccacgtggacgtcacc cctgctcagtcgaccctgcaggtggaacggaaaccaaccacgggagagctgcttgggtac cgggaggtgttcctaagtgactccgggctctcggccaagaactcgctgtctctgcagaga ccaccgggacccctggctgagtctgtacgaggcagctcaaccaattaccccttctggcca gggggcatggatgagccaagtctggatatgattcaaacggatgatgctcttgacgaagat atcgactttgagaacaatctgctgacggtgccgcctggctggaagaagggtctggacttc aagcaagcggggccgaaggctgtccctggcctcctgagcctcacagagctcatggaagtg atggacgtttaccagctggggtgttccagcgacgaggaggaggaggagaggaaccgggga actgcagaagggaagctgcccctggctcggaccaacagcctggaggaactagtgctgcag aaggtgagcacgcctcctccggccgcgggcagcaagaaggaagaggaagtggtgctggag aaggagcagtgggcagtgccagttgacgtcagcgcacccgtggacgacttctacaaacgt atcccggagccggccttcaagtggccgttcgagcccgatgtctttcagaagcaagccatc ctccgcctcgagtcccgcgactctgtgttcgtggccgcccacacgtccgctggcaagacc gtggtcgctgagtatgccattgccctctcccagaagcacatgactaggaccatatacaca tccccaatcaaggccttgtccaatcagaagttcagggacttcaagaacaccttcaaagac gttgggctgctgacgggagatgtgcagttacatcccgatgcctcctgcctcatcatgacc acagagatcctcaggtccatgctgtacaacggctctgatttgatccgggacctggagtgg gtcattttcgatgaggttcactatgtcaacgacgccgagagaggcgtggtgtgggaggag gttctcattatgcttccagaccacgtgaacctcatcctgctgagcgccaccgtgcccaat actttggagtttgccgactggattgggcggataaagcagaagaagatctacgtgatcagc accacaaagcggcctgtccccctggagcactacctgtacacgggcaacagccagaagacc cagaacgagatcttcctactcatggatgcacaggggaacttcctcaccaaggggtactac gctgccgtggatgccaagaaggaacgggccagcaagcactctcagaccttcggagcgaag cagccgacccattatgggggccccagccaggacaagagtgtttggctctccctgatcgat gtcctgaggaaaaaggacaacctgcccgtggtggccttcaccttctcccgcaaccggtgc gacgagaacgccaacatgctgaccaccgttgacctgaccagcgctgttgagaagagtgag atccacgtcttcttccagaagtgcatctctcggctgaagggcaccgaccgtgagctgccc caggtactgcggatggttcagctgctgaagcgaggtattggtgtccatcacagtggcatc ctgcctatcctgaaggaagtgattgagatgttgttcgcccgaggcctggtcaagatcctg tttgcaacagagacctttgccatgggggtgaacatgccggccaggaccgtggttttcgac agcatccgcaagcacgatggcacgaacttccgcgacctgatgccaggagaatacatccag atggcgggcagagcggggagacgagggctggacaccacggggatggtgatcatcctctgc aagactggggttcatgagatggccgacctccacaggatgatgctggggaagccaatgctg ctgcagtcgcagttccgcctgacctacaccatgatcctcaacctgctgcgggtggaggcg ctccgcgtcgaggacgtgatgaaacgcagcttctctgagttccacacccgcaaggatgcc aagatatacgagcagcgggtccaagacctgaccaagaagctggccaacgtggacgtggag tgtgttgggcagctgagtgacctagagcactactacatcaccgtacgggagctcctgtac acgcggacctctctgcagaagaaagtgatggagtcgacgagtggggtgaaggctttgtct gccgggcgagtggtggtggttaaaaatcagcagcacaggaatgcgctgggagtgatcctg caggtttccggcgactcaagcaaccgctcattcaccacccttgtgctgtgcgattcgcga ggaggcgaggaacaggaggaggagagggaagggggtgtggattcctcgacagctcccacc cctgatcagctgctcgccaacaagctcttcctgcccgagggaccctgtggccacacggtg gtgaagctctcactcgcagatatcagcagcatcacagtgaagacactgcgaatcaacaca gacaaaatcatcgacgacttcaaaaagagacaggtaccccgcttcaggaacgatccgcct ggaccgtcggtcaccacggcaacgcaggagctgctgcgtctggccgagggcagcccaggc ggcattgccagtctggacccggtcagcgacctgcagctgaaggacctggacctggtggag ggctacagcagagcacgccagctggagggctcccttggcacgtttacctgcgtccacagc cccaagtttaccactgagtacatgcggatgcaacagcggatgctgatgaaggaggagttg gagcgactgcggttcctcttgtcagaccagagcctggtcttactgcccgagtaccagcag cgcgtggaggtgctgaagaggctcaggtacattgacaatagctgtgcagtgcagttgaag ggccgagtggcctgtgagatcagtaaccacgagctgatcgtcacggagatggtgctggag aatgtgctgacggagctgcggcctgaggagatcgtcgccctgctctcctgcctcgtcttc cagcagaaaacacaagtggagcctgagctcagcgagaccctgcaaaggggcgtggacagg atccggggcgtggcggagcggattgccacactgcagcgtgagtgtggcctcagagagtcg gtggaggattttgttgaccagttgaagttcggcctggtggaggtggtgtacgagtgggca cggggtctgcctttcgccgagatcacgacactgacggacgtacaggaggggatcatcgtg cgctgcatccagcggcttaacgagacatgccgtgacgtgcgcaacgcggcccgcatcatt ggcgaccccacgctgcacgccaagatggagcaagcgtccaatctcatcaagagggacatt gtgtttgctgccagcttatacacccagtga

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