Hemitrygon akajei (red stingray): 140724805
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Entry
140724805 CDS
T11019
Symbol
brf1b
Name
(RefSeq) BRF1 general transcription factor IIIB subunit b isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140724805 (brf1b)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
140724805 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
140724805
NCBI-ProteinID:
XP_072895543
LinkDB
All DBs
Position
3:complement(29294391..29740174)
Genome browser
AA seq
688 aa
AA seq
DB search
MASSRVCRTCGCTDIDLDQARGDAVCTACGSVLEDNIIVSEVQFVENSGGGSSAVGQFVS
LDGPGKAPSLGSGFHTNLGKESRTQSLQNGRRQIHHLGNQLQLNQHCLDTAFNFFKMAVN
KRLTRGRKMSHVVAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAP
AIDPCLYIPRFAHMLEFGNRNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARM
HDFRRTVKEVIRVVKVCESTLRKRLNEFEETPTSQLTIDEFMKIDLEQECDPPSFTAGKR
KVRLQQLEQELSKKLADIEGEITSYQDEIETELEIMRPRYRGVYATYAKRDGQDDGSSVA
SLGEEEGEDEELTAVANHLNKELCDHFLNGDQSKDNDTAEEEKESEPPPKPPNILSLFGP
LPTAASLGLKESIEECIAAEESEAGADPQKGELDLNGIDDQEIDRYLLNEEEVEQKTELW
LKENADYLQEQKAKEERIAKEKELGIYKEQKPRKSSKKREPIQASTAGEAIEKMLEQKKI
SSKINYDVLRDLNSKGSSSPVKEESDSGNRAGSASGGKKGATQRRTAASSRKLAAPVSNL
GKRLRPLISSVPPKKLATREAPSSDSLPADAQAAPSVAVLVESGPVVYNEEEVEEEEDLE
EEEENCLSALQLVGGNDYGFEVEDEEGF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcccgggtctgccgcacttgcggctgcaccgatatcgacttggaccaggcg
cggggggacgcggtatgcacggcgtgcggctccgtcctggaggacaacatcatcgtgtcc
gaggtgcagtttgtggagaacagcggcggcggctcttcggccgtcgggcagttcgtgtcc
ttggatggtccagggaaagctccatcactgggatcaggatttcacaccaaccttgggaaa
gaatcgcgcacacaatctttacagaatggtcggcgacagattcaccacctgggcaaccag
ctccagttaaaccagcattgcctggacactgcttttaacttcttcaaaatggccgtcaac
aagcgcctgactcggggccggaaaatgagccatgtggtcgctgcctgcctctatctggtc
tgtcggacggaggggactcctcatatgttgttggatctcagtgacctattgcaggtgaat
gtctatgtactgggaaagaccttccttctactggccagagagctctgcatcaatgctcca
gcaatagatccctgtttatacattccccggtttgcgcatatgctggagttcggcaacagg
aatcacgaggtgtcaatgactgccctgcgactgttacagaggatgaagagagactggatg
cacacaggccgacggccttcgggtctttgcggagcagctctcctcgttgctgccagaatg
cacgatttccgaaggacagtaaaggaggtcattcgtgtggtcaaagtctgcgaatcgaca
ctcaggaaaaggctgaatgagttcgaggagacgccgaccagtcagttaacgattgatgag
tttatgaagattgacctggagcaggagtgtgacccaccttcattcacagccggaaagagg
aaggttaggctgcagcagttggaacaagaactatccaaaaaactggcagatattgaaggt
gaaataacaagttaccaagatgagattgagactgaactggaaatcatgcgaccaagatac
cgcggcgtgtatgcaacgtatgccaaaagagatggacaggatgacggttcctcagtcgcc
tcattaggagaggaagagggggaggatgaagaattgacagcagtggcaaaccatctcaac
aaggagctctgtgatcacttcctcaatggcgatcaatcaaaggacaatgacacagcagag
gaagagaaggaatcagagcctcctcccaaaccgcccaacatattgtctctgtttggtcct
ctcccaactgcagccagtctggggctaaaggaatccattgaggagtgcatagcagctgaa
gaatctgaggcaggagccgatcctcagaaaggtgaacttgacctgaatggaattgatgac
caggaaatcgataggtacctactgaatgaggaagaggtggaacagaagacggagctgtgg
ctgaaagagaatgcagactatctgcaagagcagaaagctaaggaagagcgaatagccaaa
gagaaggaacttgggatttataaagagcagaagcccagaaaatcctcaaagaaacgtgag
ccaatccaagccagtacggcgggcgaagctatagaaaagatgctggaacagaagaagatc
tccagcaagataaactacgacgtgctgagagatctgaacagcaagggcagcagctctcca
gttaaagaggagagcgacagcggtaaccgagctggcagcgccagtggcggcaagaaggga
gcaacccagcgaagaacagctgccagctcccggaaactggctgcacccgtcagcaacctg
ggcaagaggcttcgaccactgatttcttctgttcctccgaagaagctggcgaccagagag
gctccgtcttctgattcattacctgctgatgctcaagccgccccatcagtggccgtgctg
gtggagagtggacccgtggtgtacaatgaggaagaggtcgaggaggaggaggatctggag
gaggaagaggaaaactgcctcagtgccctccagctggtcggtggcaatgattatggtttt
gaagtggaggacgaagagggattctaa
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