Hemitrygon akajei (red stingray): 140724816
Help
Entry
140724816 CDS
T11019
Name
(RefSeq) estrogen receptor beta-like isoform X1
KO
K08551
estrogen receptor beta
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
140724816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140724816
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
haka03310
]
140724816
Transcription factors [BR:
haka03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
140724816
Nuclear receptors [BR:
haka03310
]
3. Estrogen like
3A. Estrogen receptor
140724816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERbeta_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
140724816
NCBI-ProteinID:
XP_072895558
LinkDB
All DBs
Position
3:30131779..30437393
Genome browser
AA seq
619 aa
AA seq
DB search
MDREQSGRRDKTQWFFERPSPSKFLLRGGCGAGMALSPRKECPPLPELPEFRAEVADNHM
KNSPPASTAQPQYSGVLSGLNESGAVCIPAPYVENRHEFPALAFYSPSILGYSVSGDASG
TENTFARQTLSPSMYWSSSGHVSPLTLHCQQPVRYTDPPRSPWSELQMEQQPPNREGLKK
KLLAPGSGIGVCNRRDAHFCAVCNDFASGYHYGVWSCEGCKAFFKRSIQGHNAYICPATN
QCTIDKNRRKSCQACRLRKCYEVGMMKSDTRRDRCSYRLSRQPRLDSGQQDGGSKVRRAV
ERVQLSESCLGQLAPEKLLNSLLEAEPPNIYSLNRPNKPFTEASMMMSLTNLADRELVHM
IAWAKKVPGFVELDLHDQVQLLESCWLEVLMVGLMWRSIDYPGKLLFAPDLILDRDEGQC
VEGILEIFDMLLAATSRFRELKLQHSEYLCLKAMVLLNSSSPLGKRSNSRRRSSPSSRPE
IHVEISHGDSHGIYPRTSGYHITYPKPGMFPRSGVSEEQENREKLHKILDTITDTLIWCM
TRSGVPPQQQATRLAHLLMLLSHIRHASNKGMEHLYSMKCKNVVPFYDLLLEMLDAHVIY
SYRKPPEEHDAGRSKGDNL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggaccgggagcagtcgggtagacgcgacaagacacaatggttctttgagcggccatct
cccagcaagttcctactgcgcgggggctgtggggcagggatggctttgtccccgaggaag
gagtgtccaccgctgcctgagctgccggaattcagagccgaggtggcggataatcacatg
aaaaattcgcccccagcttccacggcgcagccacaatacagtggcgtgctgtccggtctg
aatgaaagtggggctgtatgtatcccagcgccttacgtggagaacaggcacgaattcccc
gcgctggccttctacagcccgtccatcttgggctacagtgtgtccggtgatgccagtgga
acggaaaacaccttcgcgaggcagactctgagcccctcgatgtactggtcctcctctggc
cacgtgtctccgctcactctccactgccagcaacccgtcaggtacaccgatccccctcgg
agcccatggagcgaactacaaatggaacagcaaccacccaacagggagggtttgaagaag
aagttattggctccgggctcaggcatcggggtctgcaacaggcgggatgcccacttctgt
gccgtctgcaatgactttgcctctggatatcactatggcgtctggtcctgtgagggctgc
aaggctttcttcaaacggagcatacaaggacacaacgcctacatctgcccggctaccaac
cagtgcacgatagacaagaaccgacggaaaagctgccaggcctgcagactccgcaagtgt
tatgaagtcgggatgatgaaatcagacacccggagagaccgctgcagttaccgcctgtca
cggcagccccgactggacagcgggcagcaggatgggggcagcaaagttcgcagggcggtg
gagagagtgcagctcagcgagagctgcctcggacagctggcccctgagaagctgctgaac
tccctcctggaggctgagccccctaatatttactcgctaaaccgacccaacaagcccttt
accgaggcctcgatgatgatgtcactgaccaacctggctgaccgggagctcgtgcacatg
atcgcctgggccaagaaagtcccaggcttcgtggagctggacttacatgaccaggtacag
ctgttggagagctgctggttggaggttctgatggtggggcttatgtggcgttccatcgac
tatcctggcaaactcctctttgctcctgatctcatcctggacagggacgagggacagtgt
gtggaaggcatcctggagatctttgacatgttgctggccgccacgtccaggttccgtgag
ctgaagctgcagcacagcgagtatctctgcctgaaggcaatggttctactcaactccagt
tctccgctgggaaaacggagtaacagtcgccgaagatcttctccgtcgagtcgtcctgaa
atccacgtagaaatatcacacggtgacagtcacggaatataccctcgcacaagtggttac
cacataacatacccgaaaccaggcatgtttccccgttccggagtttcggaggagcaggag
aacagggagaagctgcacaagatcctggacaccatcacggacacactgatctggtgcatg
acccggagtggggtcccaccccagcagcaagccaccaggctggcccacctcctcatgctg
ctctcacatatccggcatgccagtaacaaaggcatggagcacctctacagcatgaagtgt
aagaacgtggttcccttctacgacctgctgctggagatgttggatgctcacgtcatctac
agttaccgcaagcccccggaggagcatgacgccgggcggtcgaagggtgacaatctctga
DBGET
integrated database retrieval system
