Hemitrygon akajei (red stingray): 140724853
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Entry
140724853 CDS
T11019
Name
(RefSeq) homeobox protein six1 isoform X1
KO
K15614
homeobox protein SIX1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140724853
Transcription factors [BR:
haka03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
140724853
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GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
140724853
NCBI-ProteinID:
XP_072895644
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Position
3:35489720..35492453
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AA seq
287 aa
AA seq
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MSVLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHSKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENTNSSGNKQNQLSPINRSKNLMSSSDEELSPPQSPDHCTGSPVLLLPGS
LNQSVDSSFSLHGLSSSPGGHAGSIHPHGLQDTLLGTLTSSLVDLGS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgctgccttctttcggttttactcaagagcaagtggcttgtgtctgcgaagtt
ctccaacaagggggtaacctggagaggctgggtaggtttctctggtcccttccagcctgc
gaccacctccacaagaacgagagcgttcttaaagcgaaggcggtggtggctttccatcgg
ggtaacttccgagagctctataagattttagaaagtcaccagttctcgccgcacaatcac
tccaagctgcagcagctctggttaaaggcccactacatcgaagccgagaagctcaggggg
aggcccctcggtgccgtgggcaagtatcgggtccgaaggaaattccccctgccccggacg
atatgggacggggaagagacaagttactgtttcaaggagaagtcgcggggtgtcctgaga
gagtggtacgctcataacccttacccatcaccgagagagaaacgggagctggctgaagcc
acggggctcaccaccacgcaggttagcaactggtttaaaaacagaagacagagagaccga
gcagcggaagccaaggagagggagaacaacgaaaacacgaattcttctggcaataaacag
aaccagttgtcccctatcaatcgtagtaagaacctgatgtctagttcggacgaggagttg
tcaccgccgcaaagtcccgaccattgcacgggcagtcccgtgttactgctgcccgggagt
ctgaaccaatctgtggattccagcttctctcttcacggcctcagttcttcgccaggaggc
cacgccggctcaatccatccgcatggacttcaggacactcttctgggcactctaacatcc
agtctggtcgacctgggatcgtaa
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