Hemitrygon akajei (red stingray): 140724861
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Entry
140724861 CDS
T11019
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140724861 (rtn1a)
03036 Chromosome and associated proteins [BR:
haka03036
]
140724861 (rtn1a)
Membrane trafficking [BR:
haka04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
140724861 (rtn1a)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
140724861 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
140724861
NCBI-ProteinID:
XP_072895660
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Position
3:36052740..36243473
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AA seq
767 aa
AA seq
DB search
MASNPFVQPFPKGQWSEGEEPEQADWSVDSGPQARAVVTGGDAAAAAESWRAEVEQPLVP
DSRGQPVTKATASAVGHPLLNQNLADTEVTEGTHVRTSGFEEYNPEVFAARGIPSFESHC
MISSDSGIEMTPGDAIDLTKTLDPIGSEKVEVQNYIDLCHSGESKAQRLAETFWEEKTMP
FVPDDTEASPENMKKSVEEAKLIEEISPSLSPEEPTTAPYVEEPSDEDISEKWEMGDTQQ
STHITPTCSVPAEVLLTEIETIVDPNSGCKSQHEQETKPKQGSDVVPTVTVSEPDDDSPI
SQTPTPSSSEESDSQIEAAYHFLEEEHPSTCKTSEQAQCFPLDATTEKTPTNDTLTKLDE
PELNVPQLQATTLDLDASSAESGDSEIEVVPDESLSVEEAEACSYMTFRQAGGAPPSSVS
SVQYSILREEREAELDSELIIDPYDASSASEESVQREQDSPLKTDSMGRESDEKILTMDN
QQESECQLSQSAEYPVSYAFDGANGKDLATTETANPQNYSAPFVTPEVVVEEPYPEEVSE
ETARKASASKSDEAKARKDLGSSQSIASEQFLVVLNKKRVIDLLYWRDIKQTGIVFGSVL
LLLFSLTQFSVVSVIAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLDLDTTLSE
EQIQKYADSALVYVNSTVKELRRLFLVQDLVDSLKFAVLMWLLTYVGAIFNGLTLMIMAV
VSMFTLPVVYEKYQAQIDQYLGLVRTHVNSVVAKIQAKIPGATRKTE
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaccctttcgtccagccgtttccaaagggacagtggagcgaaggagaggag
cctgagcaggcggactggagtgttgacagcggtccgcaggcaagggcggtagttactggc
ggggatgcagccgctgcagccgaaagctggcgagccgaggtggagcagccgctagtgcca
gactctaggggacagcctgttaccaaggcaactgcatccgcagttggacatcctttgctg
aatcagaatctagctgacacagaagttacagaaggaacgcatgttagaacatcaggtttt
gaagagtataatccagaggttttcgctgcaagaggaattccaagctttgagtctcattgt
atgatcagctcggattcaggaatagagatgacacccggggatgctattgatttgaccaaa
actttggacccaatagggtcagagaaagtagaagtccaaaattatattgacttatgccat
tctggagaatcaaaagcacagaggttagctgagacattctgggaagagaagacaatgcct
tttgtaccagatgacacagaagcctcccctgaaaacatgaagaagtcagttgaggaagca
aagttaatagaagaaataagcccaagcctgagtcctgaagaaccaacaacggcaccatat
gtggaagagccttcagatgaagatatctcagagaaatgggaaatgggggacacccagcag
agtactcacataactcctacgtgctcagtgccagctgaagttctgctcactgaaatagaa
accatagtagatcccaatagtgggtgcaaatcacagcatgaacaagagactaaaccaaag
caaggatccgatgtagttccaactgtgactgtatcagagcctgatgacgacagtccaatc
tcacaaacacctacaccctcaagttcagaagaatctgattcacagatcgaagctgcttac
catttcctggaggaggaacatccttctacctgcaagacttcggaacaagcacagtgcttt
cctttagatgccacaactgaaaagacacccacaaatgataccttaacgaaactagatgag
cctgagctgaatgtgcctcagctacaggcaacaaccttggaccttgatgccagcagtgct
gaatctggagactcagaaatcgaggtagtgccagatgaatcactttctgtggaagaagct
gaagcttgcagctacatgacattccgacaggctggtggagctccaccatcttctgtttct
tcagtccagtacagcattctgagggaggaacgtgaagctgagcttgacagcgagcttatc
attgatccgtatgatgcttcatcggcatctgaagaaagtgtccaaagagaacaagattcc
cctttgaaaactgatagcatggggagagaatctgatgaaaaaatcttaacaatggacaat
cagcaagaatcagaatgtcagctgagtcaatcagcagagtatcctgtatcctacgccttt
gatggtgcaaatgggaaagatttggccacaactgaaacagccaaccctcagaattattca
gcacccttcgttacacctgaggtagtagttgaagagccatatcctgaagaggtctctgaa
gaaacggcaagaaaagcaagtgctagtaaatcagatgaagccaaggcaagaaaggatttg
ggaagcagccagtccatagcttctgagcagtttctggtggtactaaataagaaaagagtt
attgacctgctgtactggcgtgacatcaagcagacgggaattgtctttggaagtgtgctc
ctccttttgttctcactgactcagttcagtgttgtgagtgtgatcgcctacctggcactt
gccgccctctcagccacaatcagcttcagaatttataaatcagtgttacaggctgtgcag
aagactgatgaaggacatccttttaaagcttatttggatttggatactaccctctctgaa
gagcagattcaaaagtatgctgattctgcactggtatacgtaaacagtacggtcaaagaa
ctgcgacgactctttcttgtgcaggacctggtggattctctgaaatttgcagtactgatg
tggctactgacctatgttggagctatcttcaatggcttgactttgatgattatggctgtt
gtttctatgtttaccttgcctgttgtatatgagaaataccaggcacaaattgaccagtat
ttgggactggtgaggactcatgttaactctgtagtggcaaagattcaagccaaaatccca
ggtgccacacgaaagactgagtaa
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