Hemitrygon akajei (red stingray): 140724872
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Entry
140724872 CDS
T11019
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
haka Hemitrygon akajei (red stingray)
Brite
Spliceosome [BR:
haka03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140724872 (prpf39)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_19
ARM_TT21_5th
TPR_MalT
TPR_11
TPR_15
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
140724872
NCBI-ProteinID:
XP_072895703
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All DBs
Position
3:37090339..37120068
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AA seq
717 aa
AA seq
DB search
MAARGLSETASSPNDGLASTDESDLYKNISTTSNSLPKEMLVPNSQPSDTHEISTCEPQT
LESENEVIEQETSLEPLTNLPHSLASQVESPEGSASMDTESQAENSSPDRTVEDIENVGL
NDSEISFPVEYEKFWKVVEDNPQDFTGWTYLLQYVEQENHILAARRAFDQFLSHYPYCYG
YWKKYADLERRHNNLTEANEVYRQGLQAIPLSVDLWLHYINFLKETLDSDNPETDARIKS
VFEHAVLAAGTDFRSDRLWETYINWENDRGNLQEVTAVYDRILGIPTQLYSHHFQRFREH
VQNHLPKDLISPEDFIKLRHELASTNEHFDSDGTPRSNPVAAIDINDPAQIVSEIENMRH
RIIEVRQEIYNHNENEVSRRWAFEEGIKRPYFHVKPLEKAQLKNWKDYLDFEIENGTLER
VVVLFERCLVACALYEDFWIKYAKYMENHSNEGVRHVFSRACTVHLSKKPMVHLLWAAFE
EQQGNINEARRILKALEESVPGLAMVRLRRVSLERRHGNIDEAEFLLQDAIKNSKTPSEA
SFYAVKLARLLFKVQKSLPKARKVLVEAIDFDKESPKLYLNLLELEYNSDLKLNEENILN
AFDIAVNSALPIETRIAFSQRKVEFLEDFGSDVKRLMVAYDDHQQLLKDQESLKRKAENG
SEEQEEKKQRTDATLDSTQLMSGDLQANSAAYNYNAWYQYNYQTPWNYGQYYPPPST
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgaggcttaagtgagacagcatcgtcacctaatgatggacttgcttctact
gatgaaagtgacttgtataaaaatatctccaccacaagcaattctcttccaaaagagatg
ctcgtgccaaactctcagccttctgatacccatgagatctcaacttgtgagccacaaact
ttagaaagtgaaaatgaagttattgaacaggaaaccagtctggagcccttaacaaatttg
ccacattcattagcatcgcaagtagaatctcctgaaggttcagcatcaatggacactgaa
tctcaggctgagaactcttcccctgatcgaactgttgaagatatagaaaatgtgggactc
aatgactctgaaatttcctttcctgtggaatatgaaaagttttggaaggtggttgaagac
aatccccaagactttacaggttggacgtatttgctgcaatatgtagagcaagagaaccac
attctggcagccagaagagcctttgatcaatttttatctcactatccatattgctatggc
tattggaaaaagtatgctgatcttgaacgacgccataacaacctgacagaggcaaatgag
gtgtaccgacaaggactacaagcaattcctcttagtgttgatctttggctccactatatc
aatttcttgaaggagaccttggatagtgacaatccagagactgatgcaagaataaaaagt
gtgtttgaacatgcagtgttagctgcaggaactgactttcgttcagatagattgtgggaa
acctacattaactgggaaaatgacagaggaaatctgcaagaggtgacagcagtttatgat
cgtattcttggtattccaacacagctctacagtcatcacttccaaaggtttagagagcat
gttcagaatcacctgccaaaagatttaatctctccagaggattttattaaactgcgacat
gagctggcatccacaaatgaacactttgacagtgatggtactccaagaagcaatccagta
gctgcaattgacataaatgatcctgctcaaattgtttctgaaatagaaaatatgcgccat
aggattattgaagttcgtcaggaaatatataatcataatgaaaatgaagttagccgaaga
tgggcatttgaggaaggaattaaacgtccttactttcatgtgaagccgctggagaaagca
cagctaaaaaactggaaagattaccttgactttgagatagaaaatggaactcttgaacga
gtagtagttttgttcgagaggtgccttgttgcttgtgctctttatgaagacttctggata
aaatatgccaaatatatggagaaccacagcaatgaaggtgtaagacatgtttttagcaga
gcatgcacagttcatctttcaaagaaaccaatggttcacttactatgggctgcttttgag
gaacagcaagggaacattaatgaagcaaggcgaatcttgaaagcattagaagaatcagtg
ccaggattagccatggtccgcctaaggcgagtgagtctagaacgccgtcatggaaatatt
gatgaagcagagtttctgctgcaggatgccattaaaaacagtaaaacacccagtgaggca
tctttctatgctgtgaagttggctcgtcttttattcaaagtacagaagagtcttccaaag
gccaggaaggttctagtggaagcaatagactttgataaggaaagccccaaactgtatttg
aatttgttggaacttgaatataattcagacctcaaactgaatgaagaaaacattttgaat
gcatttgacattgctgtaaatagcgcattgcctattgaaacaaggattgccttctcccag
cgaaaagtggaatttttggaagactttggctcagatgtgaaaagactcatggtggcttat
gatgatcatcaacagcttttaaaagatcaggagtccttgaaaagaaaagcggaaaatggg
tcagaggaacaagaggaaaaaaagcaaagaactgatgcaacattggactctacccagctg
atgagtggggacttgcaggctaattcagctgcatataactataatgcttggtatcagtac
aattatcaaacaccctggaactatgggcaatattatccaccaccttctacataa
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