Hemitrygon akajei (red stingray): 140725066
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Entry
140725066 CDS
T11019
Symbol
npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140725066 (npas3)
Transcription factors [BR:
haka03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
140725066 (npas3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
140725066
NCBI-ProteinID:
XP_072896134
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All DBs
Position
3:complement(64228013..65334230)
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AA seq
923 aa
AA seq
DB search
MIRIFPDFSVQVTAATSGGGGAVTAAPGVGRAAAAANGTPQDVGLTSYQQRGPSFCYQAS
VMPSLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKM
RDFANLGDPPWNLRMEGPPPNTSVKALGTQRRRSPSNIAINMFERNLGSHILQSLDGFIF
ALNQEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGILSQ
GTAEDGTSSASSSSQSETPEPESTSPTLLNIDNTLERSFFIRMKSTLTKRGVHIKSSGYK
VIHVTGRLRLRVSHSHGRVLPTQIIGLVVVAHALPPPTINEVRIDCQMFVTRVNMDLSIV
YCENRISDYMDLTPVDIVGKRCYYFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWLQKNGG
YIWIQSSATIAFNAKNASEKNVIWVNYVLSDFEYKDIPMDIAQLPNLPEKTSESSETSDS
ESDSKENSEDNENSKSDEKGNQSENSDDPESDRKKQSGSHSDHEMNCNDDDSSSNQDSRD
SDDSFENSEYESQKVAEDSFGTFGSIQIKVERYPGSESEMRLPNRESVTSDSAKDSDSAG
ELNIQPSSKHQKRKKRRKKQKGGSVSRRRLSSASSPSGLDSNLVDQPQLLSSPNSASVLK
IKTEITEPINFDNDSSIWNYPPNREISRNESPYSMTKPPSSEHFPSTQTNTSLHVTIPDS
VLTPPGTENTASRKTQFSTSSSATLAPATDPLSPPLSASPRDKQLSSTSTTSSVLYTSDL
ETLQRLQAGNVVLPLVHRVTGTLAATSTTPQRVYTTGTIRYAPAEVTFAMQGNLLPNTHA
VNFVDVNASSFGLEPKTPMEMLYHHVHRINMSGPFGSTVSGASLAQIPTGNVFTTAEGLF
STLPFPVYSNGIHTTQTLERKED
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaattttcccggatttcagtgtacaagtaacggcagcaactagtggaggaggc
ggtgcggttactgcagcacctggagtggggagagctgctgccgctgctaatgggacaccc
caggacgtggggctaacatcttaccagcaacgaggaccttcattctgctaccaagcttca
gtcatgccaagtttacaagccctgcggaaggagaaatctcgagatgcagcccgatctcgc
cgaggaaaagaaaactttgagttctatgaattggcaaaactactgccactcccagcagcc
atcacaagccagttagataaggcatcaataattcgtcttaccattagttatctgaaaatg
agggactttgcgaacctaggtgaccctccctggaatttaaggatggagggtccccctcca
aatacatctgtgaaagctttaggaacacaacgtaggagaagtccaagtaacatcgctatc
aatatgtttgaacggaatttgggaagccatattctacagtctttggatggatttatattt
gcactaaaccaagaaggaagatttttatacatctctgaaactgtctccatctacttaggc
ctttcacaggtggaactgacaggcagcagtgtgtttgattatgtccaccctggagaccat
gtggagatggcagagcaactgggcatgaaacttcccccagggcgaggcattctctcacag
ggtaccgcagaggatggaaccagctcagcatcttcgtcctcacagtctgagacccctgag
ccagaatccaccagcccgactttactgaatattgacaataccttggaacgttcatttttt
atcagaatgaagtcaacattgaccaagcggggagttcatatcaaatcatcaggctataag
gtcattcacgtaacaggacggttaagattgcgagtttctcattcccatggacgtgtactg
cccacacaaatcatcggtctagtcgttgtggctcacgctttgcctcctccaacaataaat
gaagttcggattgactgccaaatgtttgtcaccagagtaaatatggacctaagtatagtt
tactgtgaaaaccgtattagtgactacatggacctaactccagtagatatcgtgggtaaa
agatgctattatttcattcatgctgaggatgtggaagggatcaggcatagtcacttggat
ttattgaataagggccaatgtgtaacaaagtactatcgctggttgcagaaaaatggaggc
tacatttggatccagtccagtgccactattgcattcaatgcaaaaaatgccagcgagaaa
aatgttatctgggttaattacgttctgagtgacttcgagtataaggacatcccgatggat
attgcacagcttcctaatcttcccgagaaaacgtccgaatcgtctgagacttctgactct
gaatctgattctaaagaaaactcagaggacaatgaaaattccaagtcagatgagaaggga
aaccagtctgagaacagtgatgatccggaatcggacagaaagaaacaatccgggagccac
tccgaccatgaaatgaactgcaatgatgatgacagctccagcaaccaggatagcagggac
agtgatgacagttttgaaaattcagaatacgagagtcagaaagtagctgaggacagcttt
ggcacttttggttccattcagatcaaagtagaacggtacccaggcagtgaatcagagatg
cgcttgccaaaccgtgaatcagtgacgtcagacagtgccaaggattcggacagtgccgga
gagttgaacatccagccttccagtaaacaccagaagaggaagaagaggaggaaaaaacaa
aagggagggagcgtctcacgtaggaggctgtcaagtgcttcgagcccgagtggacttgac
tcaaatttagtagaccagccacaactgctgtcttcaccaaacagtgcctcagtgcttaaa
attaaaacagaaattacagaacctataaattttgataatgatagcagtatttggaattac
cctccaaacagagagatttcaagaaatgaatcaccctatagtatgaccaaacccccaagc
tctgagcacttcccctcaacacaaaccaacactagtttacatgtcaccattccagactct
gttcttaccccaccggggacagaaaatactgccagtcgtaaaactcagtttagcacctca
tccagtgctaccttagctcctgccacagaccctttatcccctcctctatcagcttctccc
cgcgataagcagctcagcagcaccagtactactagttctgtgctgtataccagtgacctg
gagacactgcagaggttacaggctggtaatgtggttcttcccctagttcacagagtgaca
ggaaccctcgctgccaccagcactactcctcagagggtgtataccactggcaccattcgg
tatgccccagctgaggtgacctttgccatgcaaggcaacctgctgcctaacactcatgct
gtcaattttgtggatgttaacgcttccagttttgggctagaacctaaaacaccaatggaa
atgctttaccaccacgtacatcgaattaatatgtcagggccattcgggagcactgtgagt
ggggccagtctggcccaaattcctacaggaaatgtgttcacaacagcagagggactattt
tccacacttccgtttcctgtgtacagtaatggtattcacaccacacaaacactggaacgc
aaagaggattaa
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