Hemitrygon akajei (red stingray): 140725142
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Entry
140725142 CDS
T11019
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
haka
Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
haka04812
]
140725142
Cytoskeleton proteins [BR:
haka04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
140725142
Intermediate filaments
Intermediate filament-binding proteins
140725142
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Fusion_gly
IFT81_CH
Motif
Other DBs
NCBI-GeneID:
140725142
NCBI-ProteinID:
XP_072896308
LinkDB
All DBs
Position
3:79269129..79601251
Genome browser
AA seq
2377 aa
AA seq
DB search
MTSATDFDNVEIQQQYSHVNARWELSDEGELDNDNSSARLFERSRIKALADEREVVQKKT
FTKWVNSHLARVTCRITDLYTDLRDGRMLIKLLEVLSGELLPKPTRGRMRIHCLENVDKA
LQFLKEQKVHLENMGSHDIVDGSHRLTLGLIWTIILRFQIQDITVETDDYSETRSAKDAL
LLWCQMKTAEYPNVNIRNFTSSWKDGLAFNALIHKHRPDLIEFDKLKKSNAMHNLQNAFD
VSERHLNVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRIGKVLDNAIE
TQKMIEKYEELASDLLTWIEQTIIVLNSRKFANSLTGVQQQLQAFNTYRTVEKPSKFQEK
GNLEVLLFSIQSRMRANNQKVYTPHEGKLISDINRGWERLEKAEHERELVLRNELIRQEK
LEQLARRFDRKAFMRETWLYENQRLVSQQQFRMVKDNFGYDLPAVEAAMKKHEAIETDIA
AYEERVQTLVDVSQELEAENYHDITRINARKENIMRLWEYLLELLNARRARLEMNLALQK
IFQEMLHIIDWMDEMKIRLLSEDCGKHLMGVEDLLQKHALQEADIVVQADRMKIINAGAL
KFTEGEGYTPCDPNIIKDRVNHLELCYEELCTLAAERKARLEQSRRFWTFFWEMAETESW
IREREQIFSSQDYGKDITSIMILQNKHKTLEDELAGLRTQLQQTIKLGNDMITENHFASP
KIKKRIEEVLAMWTDLEELAAFRRQNLLHAQSFFQYQVDADDLKTWLQDTYRIMSSDDVG
HDEFSTQTLVKKQRDLTDEIMKYATAIDGLNKQLQSLPDEFRKLPEIVDRQREIKELYTD
LVALSDLRRQQLQDALALYVMFREADACDLWMTEKEKWLEGIEIPNKIEDLEVVQHRFET
LGQEMNNLESRINEVNKAANHLIESGHPSTQEVKTCQDHVNQRWMIFQKLFGMKKSNVNS
ALSLQNYYLECDETKVWICEKNKLIESTLDLGTDLASVMTIQRKLSGIERDLAAIDSRLP
ELQKVAHTLADEYPNHAPEILKRLKEINDVWDELKHTVQGHEESLGEASKLQKFLQDLDD
FQLWLSKTQKAIASQEEPNSLPEAEMLLRQHNAIKNEVERYEEDYQRIRDSGNIITREET
DPQFEILEQRLKGLETGWKELQQMWENRKDLLSQSHGYQQFLRDSKQADTILTNQEYSLM
HVEMPKTLEAAEDALKKQEGFMTSMDANEDKIIGTIDEGEKLIKDGNTFKDKVVDKVKSI
NERYKNNKKQAEEVTAHLKDNRDLQHFLQNCQELTFWINEKMLTAQDTTYDEARNLHTKW
QKHQAFMAELASNKEWLDKIDEEGKQLMDEKPDFKPVVSEKLKELHDQWEILDSTTKDKA
HRLFQANRSELFSQGCEDLNKWMDDLESQLHSEDFGKDLTSVNILLKKLQMTENQVEVRQ
KEVEDLLSQATILSQERQLETDGKEKKIEKRFLQLMSPLQKRRQSLLSSKRSFQFFRDLE
DESLWVKERMPLATSTDHGHNLQAVQLLMKKNKTLQKEIQGHQPRIDDVLERGEKMIADQ
RPDAATIEEQLEELKGLWEKLQEEAEKRQKRLEGTNEAQQYYLDAAEAEVWMSEQELYMI
SDDKPKDEASATSMLKKHMTVQQAIMDYGKTIQELADRAQKLLAEDHPEGEQIIRRQGQV
DKLYAGLRDLASERNKKLEDMHNLFQLNREVTDLEQWIAEGDLAASSQELGQDFDQVTML
RERFREFARKTGSIGQERVDNVNNLIDDLIDAGHSEAADIAEWKDSLNEAWADLLELIDT
RTQLLAASYELHKYFYDGKELLSLIQEKHKELPEELGRDANTAESFHRMHNAFERDIHSL
GIQVQQFQDDAGRLQAAYAGDKAAAIQKQEQEVVEAWKALLDACDGRRTQLIDTADKFRF
FSMVRDLMSWMESIVRLIETEEKPRDVCSVELLKKYHQGIRAEIDARNRNFVSCIDLGKM
MLARKHHASEEIKEKLVQLTENRKLMMDKWDERWKWLDLLQEVCQFARDASVAESWLISQ
ESYLISRDIGNSVDAVEKLIKRHEAFEKSTATWDERFAALERLTTLELLEIRKRQEAARQ
SQKAQAQPEAQLVHEQKTPDATHEEKAQKEGWNMEVQEAAEITPHVTEEPSLITTSEDLS
NMVNGTDSPEDKTLESEEKLEFEEQSYERSSKLQPLILPAMEIDKPRTSATLPSFTTREE
IAQLEGYLGRKHELEGPNKKASNRSWITLYCALKSGEFYFYKDTKNYSAGVTYHGEEPLN
LKDAICEVAADYKKKKHVFKLRLNNGCEYLFHGRDEEEMHNWIHNLNVAIAEHKKSQSPY
QGDVRGHTLPLPSVTGQETSPGKKDKEKRFNIFAKKK
NT seq
7134 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggccacagattttgataatgtagagattcaacagcagtatagccacgtcaat
gctcggtgggaactctctgatgaaggtgaactcgataatgacaacagctcggcgagattg
tttgaacgttccaggatcaaagctcttgcggatgaacgtgaagttgtgcagaagaagacc
ttcaccaaatgggtgaactctcatttggcacgtgtgacttgccgcattactgacttgtac
accgatcttcgggatggccgcatgctcattaaactgctggaggttctttcaggggagcta
ctgccaaagccaacgagaggtcggatgcgaatccattgcttggaaaatgttgacaaggct
ctccagtttctcaaggaacagaaggtgcacctggaaaatatggggtcacacgatattgtt
gatgggagccaccgactgacactcggacttatttggaccatcattcttcgcttccagatc
caggatatcaccgtggaaactgatgactatagtgagactcggtcagcaaaggacgcactt
ctcctttggtgtcagatgaaaacagcagaataccctaatgtaaacatcagaaacttcaca
tcaagttggaaagatggcttagcatttaatgcccttatccacaaacacaggcctgatttg
attgagtttgacaaactgaaaaagtctaatgccatgcacaacttacagaatgcctttgat
gtctccgagaggcatctgaatgtgaccaaactgctggatcctgaggatgtctttacagag
aatccagatgaaaaatcaatcattacctacgtggtggcattttaccattatttctccaag
atgaaggcattagcagtggaggggaaaaggattggcaaggtgctggacaatgcaattgaa
acccagaaaatgattgagaaatatgaagagttggcatctgacctgctaacgtggatcgag
caaaccatcattgtcctcaacagtcggaagtttgccaactcactgaccggagtgcagcag
cagctacaggcctttaacacttaccgcacagtggaaaaaccttcaaaattccaggagaag
gggaaccttgaagtgctgctgttctccatccagagcaggatgagggcaaacaaccagaaa
gtgtacacaccgcatgagggcaaacttatctcggacattaatagaggctgggaaagactg
gagaaggcagagcacgaacgtgagctggtcctcaggaatgaactgatcaggcaggagaaa
ctggagcagctagcccgccgttttgatcgcaaggcctttatgagggagacctggctgtat
gagaatcaacgactggtgtcgcagcagcaattcaggatggtgaaggataattttggctat
gatcttccagctgtggaagcagcaatgaagaagcatgaagcaattgagacagatatcgct
gcctatgaggaacgtgtgcaaacccttgtggatgtatctcaggagctggaggctgagaat
tatcatgacatcacacgtattaatgccagaaaagaaaacatcatgcgcctatgggagtat
cttttggagctgcttaatgctcggcgagcaaggctggaaatgaatttagcccttcagaag
attttccaggagatgcttcatattattgactggatggatgaaatgaaaatacgactttta
tcagaggattgtggtaaacatttgatgggtgtagaggacttgctccagaaacatgcactg
caggaagctgacattgtggttcaagcagatagaatgaaaatcatcaacgcaggagcactc
aagtttactgaaggagaaggttacacaccctgtgatcccaatataatcaaggatcgtgtc
aatcatctggaactgtgctatgaggagctttgtacattggcagccgaaaggaaagcccgc
cttgagcaatcgcgccgtttttggacattcttctgggagatggctgaaactgagagctgg
attcgagaaagagagcagatcttctcatcacaagattatgggaaagatattaccagcatt
atgattctgcaaaacaaacataaaacactggaagatgaattagctggtctcaggactcaa
ctgcagcaaacaattaaactgggcaatgatatgattacagagaaccactttgcttcacct
aagatcaagaaacgcattgaggaagttcttgcgatgtggacggacttggaggaattggcg
gctttccgcaggcaaaatcttctgcatgctcaaagcttcttccagtatcaagtggatgca
gatgatctcaaaacctggttacaggacacttaccgtattatgtcttcagatgatgtcggc
catgacgaattttcaacacagacattggtgaagaaacaaagagaccttacagatgaaatc
atgaagtatgcgacagcaattgatggtctaaataaacagcttcagagcctcccagacgaa
ttcagaaaattaccagagatagtggaccgacagagggagataaaggagctctatacagac
ctggtggccctttcagatctacggaggcagcagctccaggatgctctcgctctctatgtg
atgtttcgtgaagctgatgcatgtgatttgtggatgactgagaaagagaagtggctggag
ggaatcgagattccaaataaaatagaggatttggaagtggtacaacacagatttgaaaca
ctgggacaagaaatgaacaatctggagtctcggatcaatgaagtaaataaggcagcaaac
catctgatagagagtggtcatcccagcactcaggaagttaaaacatgtcaggatcatgtg
aaccaaagatggatgatattccagaagttatttggaatgaagaagagcaatgtgaactct
gcattaagccttcagaattattatcttgagtgtgatgagacaaaagtttggatctgtgag
aaaaacaagctcattgaatcaactctggatctgggaactgacttggctagtgttatgact
attcaaaggaaattgagtgggattgagagggacttggctgccattgattccagactccca
gaattgcagaaagtagctcatacattggcagatgaatatcccaatcatgctcctgaaatc
ctgaaaaggcttaaggaaatcaatgatgtttgggatgagttgaaacacactgttcaaggt
catgaggaatcacttggcgaggcaagcaaattgcagaaatttctgcaagacttagatgac
tttcagctgtggttatccaaaacacaaaaagctattgcttctcaggaagagccaaactcc
ttacctgaagcagaaatgctcctcaggcaacacaatgccattaaaaatgaagtagagcgc
tatgaggaagattaccaaaggatcagagatagtggaaatatcataactcgggaagaaaca
gacccacagtttgaaatattagaacaacgattgaagggattggagactggttggaaagag
cttcaacagatgtgggaaaacagaaaagatcttctctctcagtctcatggatatcagcag
ttcctcagggacagcaaacaagcagacaccattctcaccaatcaggagtacagcttaatg
catgttgaaatgccaaaaaccttggaggcagctgaagatgctttaaaaaagcaagagggt
tttatgacaagcatggatgccaatgaagacaaaatcattgggacaattgatgaaggagaa
aagctcattaaagatggaaatacttttaaagacaaggtggttgacaaggtcaaatcaatc
aatgaaaggtacaaaaataataagaagcaagctgaagaggtgactgcacatcttaaagat
aaccgagatcttcagcatttcctacagaactgccaagagcttactttttggatcaatgag
aagatgctaacagcccaggacactacttatgacgaggctcgcaatctccacacaaaatgg
cagaaacatcaagcatttatggctgagctggcatcaaacaaggaatggctggacaaaatt
gacgaggaaggaaagcagctgatggatgagaagccagattttaaaccggttgtctccgaa
aaactgaaggaactgcatgatcagtgggaaatcctggattccaccactaaagacaaggca
caccggctgttccaagcaaatcgatcagagcttttctcacagggctgtgaagacttgaac
aagtggatggatgacctggagtcacagctgcattctgaagactttggaaaggacttgacc
agtgtcaatatcctgctgaaaaagctacagatgacggagaatcaagtggaagtgcgacag
aaagaggtggaggatcttctaagtcaggccacaattctctcccaagaaagacaattggag
actgatgggaaggaaaagaaaatagagaagaggttcttacagctgatgagcccactgcag
aaacggcgtcaaagtcttctctcatcaaagaggagttttcagttttttcgggatctggaa
gacgaatctctttgggtgaaggaacgaatgcccttagcaacgagcacagaccatggccac
aatctacaggcagtgcagctcctaatgaaaaagaataagactttgcagaaggagattcaa
gggcatcagccacgtatagatgatgtgttagaaaggggagaaaagatgattgcagatcaa
agacccgatgcagctactattgaagagcagttggaagagttgaaaggattgtgggaaaaa
ctacaggaagaagcagagaaaaggcaaaagcgtctggaaggaacaaatgaagcccagcaa
tattatcttgatgctgcagaagctgaagtttggatgagtgaacaggaactctacatgatc
tctgatgataaaccaaaggatgaagccagcgcaacttcaatgttgaagaaacacatgacc
gtgcagcaggctataatggattatggaaagactattcaggagcttgctgacagggcccag
aagcttcttgctgaagaccacccagagggtgaacagatcattaggcgtcaggggcaggtg
gacaagctgtatgcaggactcagagatctagcaagtgagcgtaacaaaaaattggaggat
atgcacaatctcttccagttgaaccgtgaggtaacggacctggagcaatggattgcagaa
ggagatctagcagcgtcttcacaggagctaggacaagactttgatcaagttacaatgctg
agggaaaggttccgtgagtttgcccggaaaacagggtcaattggtcaggaaagagtggac
aacgtgaacaatctgatcgatgacctcattgacgcgggtcactccgaggcggctgacatt
gcagagtggaaggacagcctgaacgaagcctgggctgatctgctggaactgatagacacg
aggacacagctgctggctgcctcctatgaactccacaaatatttctatgatggtaaagag
ctcctgagcctgatccaggaaaagcacaaggagttgccagaggagcttggccgcgatgcg
aacacggcagagtctttccacaggatgcacaatgcatttgaacgtgacattcattccctg
ggaatacaggttcagcagttccaagatgatgcaggacgtttgcaagcggcttacgcaggg
gataaagctgcagcaatccagaaacaagagcaagaggtggtagaggcctggaaggcactt
ctggatgcttgcgatggtcggcgcacccagttaattgataccgctgataagttccgcttt
ttcagtatggtccgggatttgatgtcgtggatggagagtatcgtaaggctgatcgaaaca
gaagaaaaaccacgtgatgtctgttctgtggagctactgaagaagtaccatcaaggaatc
agagcagaaattgatgccagaaacagaaattttgtgtcctgtattgacttgggcaagatg
atgttagcccgcaaacatcatgcttctgaagagattaaggagaagctggtacaactcacg
gagaacagaaaattgatgatggataagtgggatgaacgctggaagtggttagacctttta
caagaggtatgtcagtttgcaagggatgcttcagttgctgaatcatggctgatttctcag
gagtcctatctcatcagccgtgatattggcaacagtgtggatgcagttgaaaaactgatc
aagagacatgaggcctttgaaaaatcaacggctacgtgggatgagaggtttgctgcactg
gaaagactcaccactttggagttactggagattcggaaaagacaagaagctgccaggcag
agccagaaagcccaagcccagcctgaggcacaactagttcatgagcaaaaaacacctgat
gcaactcatgaagagaaggcacagaaagaggggtggaacatggaagttcaggaggcagca
gaaataacccctcacgtaacagaagaaccatcactgataactacatccgaggatttgtcc
aacatggtaaatggtactgacagcccagaagataaaactttggagagtgaagaaaaatta
gagtttgaagagcagtcttatgaaaggtcctccaagcttcaacctctgatattgcctgca
atggaaatagacaagcccagaacatcagctacacttcccagttttaccacaagagaagaa
attgcccagctggagggatatctgggacgtaaacatgaactggaaggacctaacaagaag
gcatcaaacaggtcatggatcaccttgtactgtgccctgaagagtggtgaattttacttc
tacaaagacacaaagaattatagtgcgggtgtaacataccacggagaggagccactgaat
ctgaaagatgctatttgtgaagtggctgctgattacaagaagaaaaagcatgtatttaaa
ctgcggttgaacaacgggtgtgagtacctattccatggcagagatgaggaggagatgcac
aactggatccacaatctcaatgtagcaattgcagaacataaaaagtcacagagtccatat
cagggagatgtcaggggacataccctccctctcccctctgtgactggtcaagaaacgagt
cccggcaaaaaggacaaagaaaaaagattcaacatttttgcaaaaaagaaatga
DBGET
integrated database retrieval system
