Hemitrygon akajei (red stingray): 140725332
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Entry
140725332 CDS
T11019
Name
(RefSeq) uncharacterized protein
KO
K16469
rootletin
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
haka03037
]
140725332
Cilium and associated proteins [BR:
haka03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
140725332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
140725332
NCBI-ProteinID:
XP_072896761
LinkDB
All DBs
Position
3:complement(118657366..119005774)
Genome browser
AA seq
2035 aa
AA seq
DB search
MSSPGVEVKLEAVIQKLEETVLNPEVPEEDKSLTVCGEGQDSVPTPVTARIREIITKNLS
EESMEVQQGRSSVTSLQRENYLLKEELSRMEDQLAQSHAERDELVIKFHAVNERLEKCLK
FEVSEREQEAAESKAVLDLCRKFDDEERAYRRKIQAYQDGQQRQAQLVQKLQAKVLQYKK
RCGELEQDIIEKASESEQQKVSLQTRLETTESHLRRTEYEHNAELESTLIRLEEEQQRGS
SLSQVNAMLREQLEQANAANQRLSEDIHKITADFGKARNELEHKGMKQRWGQEMHGSRLT
GSHGKLLTLWRQVAGVRGDLTDLKSGMEQNLMELNADIVQTTQRLQSACLKLDSNLHLPQ
SSATSALEKYTVQNSRLEQQLRSKVREMIQMQSKCDVEKAELHARINELSVALERLKIQN
AEKERTITSLNRTLEKLESGTIEVTSESQENEALRTEIESLHQTLHNIAQAAILDADMAS
SLSREAVSEETEADSGRVGPTSVRTSSPWRHRSPTHSRSPLRNRSPSAGDSTLSAVQTAL
QRRQLQVQELRGRVEAVQDVVISLKKQLGEAESERRQLEQNLEKLKGEAEDSNRAKEDAK
RDAGRYRSSLEILGSEKADLEKVVHSLNQQIDSLHLDLERQRAANDDLKRQRDHIEDKKE
ETQRDYEQAKKEAERGQKSLELMEVRNSTLRKDLVTMKEALNKAILEKEVLQNEKGGLIE
ALTKAELNSADLELSLNKLKTEKDTLRDSLAKMTALSEGLAQDKVEMNRILLQMEDDRTV
LQGQKKEIEKAKASIQDVLVRVKQEKMDLDTEKCGLDQSLQIVEASQEQLEHDIVVLQRA
RDQLQDQLGQANRQKQTLSEQLAQAQRDGELQSAGLLRASKEKEEMMKEKASLVVQLTAA
ERESRALSEEIAALRADKEALETNLFEAQQLIVQLETCKEQLEGENQSILFAKESLLAEV
DLVRKEMDLQLINVNREKELLQEKLGQVEKESHISLKNEQQLREEDVERLQKEKEWLRIE
LTAEKAEAVQHLQQEREELISHFEEEKEELNEEILTLQKERDERLIQAESIKQQALYLKE
SEKNILSEKLSHTQRELGNSTIEIDRLKREMQTQQEQDKDTINTINTDLKDLQSRFEEAV
AAHEREVKRLNEQLKDLTRQREVSHREVEELKTQLRLVEDVRDGIRRDLIEAHRKVRENE
EAQELQRKENLELKRVLSDEAREKEAIQKSNEELRNNIKKVESERISLKRTNEEKEQKMK
IVEDAKTTAQNEAGELRANLRDVEKSRLDARRELQELRRQVKMLDNENAKKSKEVAELQS
RIALEEQRSEECRRESLDLKQKITEAEVNRESARKEIAVLQKKIVDVESKFHGREKELLE
QLENCQLNEKKFLDNKHGLEKKLQQAQEEADKLMLKICAMEGRITGLEAELSKVEAAKRD
IEFQLDSLHSTLRRTLGIGRSGRSPSPRRPLSPTKGSDSTFVATTDGWDSPVPQAGSPGH
SHSSSPYRSVSPVRGRQYAADIDPEVVKGALQDFLQELRGAQRQKDEAHTQLVKLTQKLS
QMETERERMKGHIQQLQKSLTEAEEGKRGLEGRLSNAQTALVLQEETNKRAEREKKALAE
RVATLEQSLQSSEGERQAHQEKINRMKVNEAKLEADRRKLKEALEASESRVTKLELLRRS
LEGELQRGQLTLNDHETEAQVLQDRTKMLQRQLADSETKAAALQLSVDRLSMMLTKTEES
ENNLKDKVQSLSSTLSDTSAGSTLLQDRISQLQKALTSSEQDRRVLQERLDTICQDLADT
KKKNNALVERVQSMQKSQGNLELRHLETEGQNRQLQEMLQQRQESEQEVLKFIEKLQQEK
HTSQERVASLQRVVAQLENEKRELQRSKVCLEKDQSALRRTLDRIERDRLRSEEDVLRLS
VEKGQLDQSLSGAEMDLAETQRQIQQLQGLTAEMEQSHSQRLTELTTRHHQELEKETKRL
RIANQQAERVLEAKERAHRKRVKELEEQVAILQEQLDREMRKRQVYISQMLKSGK
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgccgggggtcgaggtcaagctggaggctgtgatccagaaactcgaagagact
gtcctgaatccagaggtgcccgaagaggacaaaagtctgacggtgtgtggtgaggggcag
gactctgtcccaactccagtcactgctcgaatccgagagattattaccaagaatctatcc
gaggaaagcatggaagttcaacaaggcaggagttcagtgaccagtcttcagagagagaac
tatctgctgaaggaggagctatctcgcatggaagaccaactggcacagagccatgccgag
cgtgatgagctggttatcaagttccacgcagtcaacgagcgactggagaaatgcctcaag
tttgaagtgtctgaaagggaacaagaggcggctgagtcaaaagctgtgttagatctctgt
cgcaagtttgacgatgaagagagggcatacaggagaaaaattcaagcctatcaagatgga
cagcagcgccaggctcaactggtgcaaaagctccaggctaaggttttgcagtataagaag
cggtgtggtgagctggaacaggatatcatcgagaaagcctctgagtcggagcaacagaaa
gtgtcattacagacacgcttggagacaacagaatcccacttgaggaggacggaatatgag
cacaatgctgaactggaaagcactctcattcgcctggaagaagagcagcaaagaggcagc
agcctttcccaagtcaacgccatgctgcgggaacaactggaacaggccaatgcagccaat
cagagactcagtgaggacatccacaagatcacagctgactttggcaaggctaggaatgaa
ctggagcataaaggaatgaagcagcgatgggggcaggagatgcatggctcccgtctgact
ggcagtcacggcaagctgttgactctgtggaggcaggtggctggggtgcgcggtgacctc
acagatctgaagagcgggatggagcaaaatcttatggagctaaatgctgatatcgtccaa
acaactcaacgtctacagtctgcatgcctgaaactagactccaacttgcatctgcctcag
agcagtgccacttcggcactggagaagtacaccgtgcaaaatagccgactcgaacagcag
ctccgcagcaaggtcagagagatgattcaaatgcagagcaagtgcgatgtggaaaaagca
gaacttcatgcaaggattaacgagttatctgttgcattggagagactcaaaatacagaat
gcagagaaggagcgaactatcacctcactcaaccgtaccctggagaagttggaatcgggt
acaattgaagttacaagtgaatcccaggagaacgaagccctcaggactgagatagaatcc
ttacatcaaaccttacacaacattgctcaggctgcaattcttgatgcggacatggcgagc
tctctgtctagggaagcagtgtctgaagagactgaggctgattctggcagagtggggcca
acctctgtccgtacatcttctccgtggaggcacaggtcacccacccactcccgatccccg
cttcgcaaccgctccccgtctgctggcgactccacgttgtccgcagtccagacggcactg
cagaggcggcagctgcaggtgcaggagcttcgtggtagagtggaggctgttcaggatgtg
gtcatctctttgaagaaacagcttggagaggctgagagtgagcggaggcagttggagcag
aacctggagaagttgaaaggtgaagctgaagactcaaaccgagccaaggaagatgccaag
agggatgcaggccgctaccgatcctcgctggagatcctgggaagtgagaaggcggattta
gagaaggtggtgcactctttgaaccagcagatcgacagcttacacttggacctggagcgc
cagagagccgcaaatgatgatttaaagcggcagcgcgatcacatcgaagacaagaaggaa
gagacgcagagagactatgagcaagccaagaaagaggctgaaagaggacagaagtcatta
gagcttatggaagtcaggaactcaactctaaggaaggacttagtgactatgaaggaagct
ttgaacaaagctatattggagaaggaggtgctgcagaatgagaaaggaggcctgattgag
gctctcaccaaggccgagttgaatagtgcagaccttgagttgtccttaaacaagctgaag
actgagaaagacaccctgcgagattctcttgccaagatgactgcacttagtgaaggtttg
gctcaggataaggttgaaatgaatcgcattctcctccagatggaagatgatagaacagtt
ctgcaaggacagaagaaagagattgagaaggcaaaggctagtatccaggatgtattggtc
cgcgtcaagcaggagaagatggacctggacacggagaaatgtggattagatcagtctctg
cagattgtggaggcaagccaggaacagctggaacatgatatagtggttctccaaagggcc
agggatcaactgcaagatcagcttgggcaggcgaatcggcagaagcagaccctgagtgag
cagctggctcaagcgcagcgagatggggaactgcagagtgcagggctcctccgggccagc
aaggagaaggaggagatgatgaaggagaaagccagcttggtggtgcagctgactgctgct
gagagggagagcagagcactgtcggaagagatagctgccctcagggcagataaggaagct
ctagagaccaatcttttcgaggctcagcagctcattgtgcagcttgagacctgcaaggag
cagctcgaaggagagaaccaatccattttatttgctaaggagtcactcctggctgaggtt
gaccttgttcgtaaagagatggacttacagctaatcaatgtcaaccgagagaaggagttg
ttacaagaaaaactgggtcaggtggagaaggagagccacatctcactgaaaaatgagcaa
caactccgtgaagaggacgttgaaagacttcagaaagagaaggaatggctgcgcattgag
ctgacagcggagaaagctgaggctgttcagcaccttcaacaggagcgtgaagaactaatc
agccactttgaagaggagaaggaggagctgaacgaagaaattctcactttacaaaaagaa
agggatgagagactgatccaggcagagagcataaagcagcaggctttgtatcttaaagag
tcagagaaaaatatcctgtctgaaaaactcagccatactcagcgagagcttggtaattca
accatcgagattgatcgattgaagcgagaaatgcagactcaacaggagcaggacaaggat
accattaacaccattaatactgaccttaaggacctccagagccggtttgaggaagcagtg
gccgcacatgaacgagaagtcaaacgtcttaacgagcagctgaaagatttaacccgtcag
agagaggtgtctcacagagaggtggaggagctgaagacacaactccgcctggtggaggat
gttcgagatggaattcggcgagaccttatcgaagctcacaggaaggtgcgagagaatgag
gaggctcaggagctgcaaaggaaagagaacctggagctcaaacgtgttctaagtgatgaa
gcgcgggagaaggaggccatccagaagtccaatgaggaacttaggaataacatcaaaaag
gttgaaagtgagaggatcagcttaaagagaacaaatgaggagaaggagcagaagatgaaa
atcgttgaagacgccaaaaccacagctcagaatgaggcaggagaactgcgtgcaaacctc
cgggacgtggaaaaatccagactggatgctcggagagaattgcaagaacttcgacgtcag
gtaaagatgctggacaatgagaatgcgaaaaagagcaaggaagtggcagagctgcagtcc
cgcatagcattggaggaacagcgcagtgaggagtgcaggcgggaatctcttgacctgaag
cagaagattacggaggcagaagtaaaccgtgaatcagctcgcaaagagattgctgttctt
caaaagaagatagtagatgtggaaagtaagttccatggacgtgagaaagaacttcttgaa
cagttggagaactgccagttgaatgagaagaagttcctggacaacaaacacggcctggaa
aagaagctgcagcaagcccaggaggaagcagataagctgatgctgaagatttgtgccatg
gaaggccgcatcactggtcttgaagctgaactgtctaaagtggaggctgccaagagggat
atagagttccagttagatagcttgcactccacactgaggagaaccttgggaattggacgg
tctggccgtagtccatcaccgcggagacctctctctcccaccaaaggatctgacagtacc
ttcgttgccaccaccgatggatgggacagcccagtcccacaagcgggatcccccggtcac
agccattccagctcaccttaccgctcggtgtcacctgtccgaggcaggcagtacgcggcg
gacatcgacccagaggtggttaaaggtgcactgcaagacttcctgcaggaacttcgtggt
gcacaaaggcaaaaggatgaggctcatactcagctggtaaaactgactcagaagctgtca
caaatggaaactgagcgagagcggatgaaaggacacattcaacagctccagaaatccctg
accgaggcagaggaagggaagcgtggattggaaggacggttgagcaatgctcagactgcg
ctggtgctgcaagaagagaccaataaacgcgcagagagagagaagaaggccctagctgag
cgggtagccactttggagcagagtcttcagtcatctgaaggggagaggcaggctcaccag
gagaagatcaataggatgaaagtaaatgaagcaaagctggaggccgacaggcgtaagttg
aaagaagcgctggaggcatctgagagccgtgtcaccaagctggagctactccgccgctcc
ctcgagggggagctgcagcgagggcagctgaccctgaatgaccacgaaacggaggcacag
gtcctccaggaccgaaccaagatgcttcagcggcagctggctgacagtgagacaaaggcc
gctgccctccagctctctgtggatcgtctgtcaatgatgctgactaagacagaagaaagc
gagaacaatctgaaggacaaagtacagagtttgtcgtcgactctttcagacacaagtgct
ggcagtacgttactgcaggacaggatttcccaactccagaaagccctaacctccagtgaa
caagaccgacgagtacttcaagaacgactagacactatctgtcaggatcttgcagacacc
aagaagaaaaacaatgccctggtcgagcgtgtgcagtccatgcagaaatcgcaggggaat
ctagagctgaggcacttggagacggaaggacagaatcgccagctgcaggagatgttgcag
cagagacaggagagtgagcaggaggtgctgaagttcatcgagaagcttcaacaagaaaag
cacacttcccaggagcgagtagccagcttgcagagggttgttgcacagctagagaatgag
aaacgagaactacaacgttcgaaggtgtgccttgagaaagaccaatctgccctcaggaga
acacttgataggattgagcgggacagactgaggtctgaagaagatgtcttgcggctgtca
gtggagaaaggacagttggatcagtcactcagtggtgcagaaatggatctcgcagaaacg
caaaggcagattcagcagctgcagggactgacagctgaaatggagcaaagccacagccag
agactaacggagctgaccacccgccaccatcaggagctggagaaggagaccaagcgcctt
aggattgctaatcagcaggctgagagagtactggaggccaaggaacgagcccatagaaaa
cgcgtgaaagaacttgaagaacaggtagctatcctgcaggagcagttggaccgggagatg
aggaaaagacaagtctatatttcacaaatgcttaaatcaggaaagtag
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