Hemitrygon akajei (red stingray): 140725596
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Entry
140725596 CDS
T11019
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140725596 (sox2)
Transcription factors [BR:
haka03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
140725596 (sox2)
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
140725596
NCBI-ProteinID:
XP_072897347
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Position
3:complement(167224318..167396895)
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AA seq
295 aa
AA seq
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MYNMMETDLKPPAPQQTSGGTGNSNTAGNNAKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGANAMNAGVGVGVGAAVNQRMDGYAHMNGWTNGGYSMMQEQLGYSQHQG
LNAHNVAQMQQMHRYDMSALQYNSMTSAQTYMNGSPTYSMSPAYTQQSTDFFPLSLPEGN
DFLWRWTPQEIINCVHRWQLLLLPYYCEKYYGNTEPIHVLARSPGFWCSNALMDP
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgatctcaaacctcccgccccacaacaaacttcgggggga
acaggcaactcgaacacggcgggaaacaacgcgaaaaacagcccggacagggtgaagaga
cccatgaacgcgtttatggtgtggtcgagagggcagcggcggaaaatggcccaagaaaac
cccaagatgcacaactcggagatcagcaagaggctcggggccgagtggaaacttttatcc
gaggccgagaagaggccgttcatcgacgaagccaagcggctgcgagccttgcacatgaag
gagcacccggattataaataccggccccggaggaaaaccaagaccctgatgaaaaaggac
aagtacaccctaccaggcggcctgctggctcccggcgccaatgccatgaacgcgggagtc
ggggtcggcgtcggggccgcggtcaaccagcgaatggacggttacgctcacatgaacggc
tggacgaacgggggctacagcatgatgcaggagcagctcggctactcccagcaccagggc
ctgaatgctcacaacgtggcccagatgcagcagatgcaccgctacgatatgagcgctctg
cagtacaactcaatgaccagcgctcagacctacatgaatggctcacccacctacagcatg
tccccagcctacacacagcaaagcacagatttttttcccttgtcgcttcctgaaggcaat
gatttcttgtggagatggactccacaagaaatcatcaactgcgttcatagatggcagcta
ctgctactgccatattactgtgagaaatattatggcaacacagagccaatccacgtcctt
gctcggagccccggattctggtgctcgaacgctttgatggatccctaa
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