Hemitrygon akajei (red stingray): 140725689
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Entry
140725689 CDS
T11019
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140725689 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140725689 (u2surp)
Spliceosome [BR:
haka03041
]
Complex A
U2 snRNP components
U2 related factors
140725689 (u2surp)
Complex B
140725689 (u2surp)
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Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
RRM_7
Motif
Other DBs
NCBI-GeneID:
140725689
NCBI-ProteinID:
XP_072897611
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Position
3:180449025..180548763
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AA seq
974 aa
AA seq
DB search
MTSSKRTLSKKEQEEIKKKEDEKAAAEIYEEFLASFEGADSNKVKAFVRGGIVNATKERF
EEQKGKLYKPSTRVPEIKNIMPDKSSPPSFVSDPKKPPLKKGEKEKKKSNLELFKEELKQ
IQEERDERQKTKGSKDTSFRPSRFEPLPSEDSSQSRRSSESSRRNRQTNALEEFTPGSHD
SGDPTTTNLYIGNINPKMNEEMLCQEFGRFGPLASVKIMWPRTEEERARERNCGFVAYMN
RRDAERALKNLNGKIIMDFEMKLGWGKAVPIPPHPIYIPPAMMELTLPPPPSGLPFNAQP
RERLKNPTTPVMPPKNQDDFEKTLSHAIVKVVIPTERNLLCVIHRMIEFVVREGPMFEAM
IMNREINNPMFRFLFENQSPAHVYYRWKLYSILQGDSPTRWRTMDFRMFKNGSFWRPPPL
NPYLQEILEETETRAEENVKKGQLKEESQRDKLEELLRGLTPRKNDVGDAMVFCLNHAEA
AEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKYFESKLCQIFAN
LNATYKSIQGHLQSENFKQRVMGCFRAWEDWTVYPDPFLIKLQNIFLGLVDLEDESKELC
KPQEGEVGGTHNSYHRWVSSERPDPEDLDGTPVEDEIDGAPLEDVDGVPIDLNTGIDDLD
GVPMKVLDDDLDGVPIDGIEETNTKKFQSVFKVAPSKWEAVDEAELESQAVTTSKWELFD
QPTESEEDEQPADSTLKESDDEDDDDVDDQVSRSEELLYYTNPAKEETSEPKPILKYSEM
SEEKRAKLREIELKVMKFQDELESGKRPKKAGQTMQEQVEHYRDKLLQREKEKELERERE
RDKKDKEKDVIKSEFRVKDRKEKESSSSPSGKERKRKHSASVSPTRVARRVKSPSPRSER
SDRSRTKDSPHTRSAHKDTSRDTNKKSKRSRSGSRTPKRSKRSRSRTPRKSSKKSRSQSR
SPHRSHKKSKKSKH
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctcaaaaaggaccctcagtaaaaaggaacaggaggaaattaaaaagaaggaa
gatgagaaggcagcagcagagatatatgaagagtttttggcctcttttgagggggctgac
tccaacaaagtaaaagcttttgtaagaggaggcattgtaaatgcaacaaaagaacgattc
gaggaacagaaaggaaagctgtacaagccttctacacgggttcctgaaataaagaacata
atgccagataaatcttctccaccgtctttcgtatctgatcccaagaagcctcccctaaag
aagggtgaaaaggagaagaagaaaagtaatttggaactattcaaagaggaattaaaacaa
atccaggaagaacgtgatgaacggcagaaaacaaaagggagtaaggatacttctttcagg
cctagtcgttttgaacctctgccatcagaagattcttcgcaaagtcgccgctcttctgaa
tcttcaaggcgaaacagacaaacaaatgcacttgaagaatttactcctggctctcatgat
tctggagatccaactacaactaatttatatattggtaacattaatccgaagatgaatgaa
gaaatgctatgccaagaatttggacgctttggccccttggctagtgttaagataatgtgg
cccagaacagaagaagaaagagccagagaaagaaattgtggatttgtagcctatatgaac
agaagggatgctgaaagagctttgaaaaatctaaatgggaaaattattatggattttgaa
atgaagttgggctgggggaaagctgtgcccattccacctcaccccatttatattccacct
gctatgatggagttgactctaccgccacctccatctgggttacctttcaacgctcagcca
cgggagagactaaagaaccccacgacaccagtgatgccaccgaaaaatcaagatgacttt
gaaaagactctgtcgcacgccatagtcaaagtggttatcccaacagaaagaaacttattg
tgtgtaattcatcggatgatcgaatttgttgtgcgtgaaggacctatgtttgaagcaatg
atcatgaacagagaaataaacaaccccatgttcaggttcctttttgagaatcaaagccct
gcccatgtttattacagatggaaattgtattccatactccagggtgattctcctactcgg
tggagaacaatggatttccgcatgtttaagaatggatcattttggcggccgccgcctcta
aatccatacctgcaagaaatattagaagaaacagagactcgagctgaagagaatgtgaag
aaaggacagttaaaagaggaaagtcaaagagataaattggaggaactcttgcgtggacta
acacctcgaaaaaatgatgttggcgatgctatggtgttctgtctgaatcatgctgaggct
gctgaagaaatagtggaatgtattgcagaatctttgtccattttgaaaactccattgcct
aaaaagatcgccaggctttatttggtgtcagatgtgttatacaattcatcagctaaagtt
gcaaatgcctcatactacagaaaatattttgaatctaagctgtgccagatatttgcaaac
cttaatgcaacttacaagtcaattcaaggtcacttacagtctgagaatttcaagcaaaga
gtaatgggctgctttagagcatgggaagattggacagtttatcctgacccattcctcatt
aaactacaaaatatctttcttggacttgtagatctcgaggatgaaagtaaagaactctgc
aaacctcaggaaggagaagttgggggaacacacaacagttatcatcgatgggtcagcagt
gaaaggccagaccctgaagatcttgatggaacaccggttgaggatgaaattgatggtgcc
ccattggaggacgtagatggagttccaattgatttgaacactggaattgatgatctagat
ggtgtccctatgaaggtgctagatgatgaccttgatggggttcccatcgatggcattgaa
gaaaccaacaccaagaagtttcagtcagtttttaaagttgctccatcaaagtgggaagca
gtagatgaggcagaattagaatctcaggctgttactacttcaaagtgggaactctttgac
caaccaactgaatcagaggaagatgaacaaccagcggacagtacattaaaggaaagtgat
gatgaagacgatgatgatgttgatgatcaagtctctagatcagaagagttgctttactat
actaacccagcaaaagaagaaacttcagaacccaaacctattcttaaatattcagaaatg
tctgaagagaagcgagcaaagcttcgagaaatagagcttaaggtaatgaagttccaggat
gaactagaatctgggaaaaggcctaaaaaggcaggtcagaccatgcaagagcaagtggaa
cattatcgagacaaactccttcagcgggagaaggagaaagaactggaaagagaaagagag
cgtgacaaaaaggacaaagagaaagatgtgattaaatcagagtttcgtgtaaaagatagg
aaagaaaaagagagctcctcctcaccttcaggcaaagagaggaaaaggaaacacagtgca
tctgtcagtccaactcgtgtggcgaggcgtgtgaaatcaccgtcaccacgttcagaacgg
tcggataggtcgcgtaccaaagacagtccacacactcggtcggctcataaagacacatct
agagacacaaataagaagtccaaaagatcacgatccggttcgaggactccaaaaaggtcc
aaaagatcgcgctctaggactcccagaaaatcttcaaaaaaatctcgatcccagtccaga
tctccgcatcgatcacacaagaaatccaagaagagcaaacactag
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