Hemitrygon akajei (red stingray): 140725763
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Entry
140725763 CDS
T11019
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140725763 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140725763 (dhx36)
03012 Translation factors [BR:
haka03012
]
140725763 (dhx36)
Enzymes [BR:
haka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140725763 (dhx36)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
140725763 (dhx36)
Translation factors [BR:
haka03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
140725763 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NB-ARC
AAA_14
Ntox8
AAA_23
PhoH
ABC_tran
NACHT
Motif
Other DBs
NCBI-GeneID:
140725763
NCBI-ProteinID:
XP_072897741
LinkDB
All DBs
Position
3:complement(191892167..192021438)
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AA seq
968 aa
AA seq
DB search
MSSGGRRDWRSGGGSSAAGGWDNSSRGGGGGGSGRGRHPGHLKGKEIGLWYAKRQGQKSK
DQERKERAVVHMDEKREEHITRLLNSVQACSDNKDQRSSLSADLSMNWRNPSSSTSVKKE
FKPETSADLEYLFETVTRDVFLDEELREDLSKKMTSSRYLEMKKFREKLPSYTMKHEVVD
LISTNQVVVISGETGCGKTTQVTQFILDDYIERGMGSLCRVVCTQPRRISAISIAERVAA
ERAEVCGEGNSTGYQIRLQSRFPRKQGSILYCTTGIVLQWLQSDSLLSTISHLVLDEVHE
RSLQSDVLMTIVKDVLAFRSDLKVILMSATLNAEQFSEYFRSCPMLHIPGFTFPVKEYIL
EDVIELLNYRPQGQEVRKPSSRRRFMQGCMFRPEKEQVEEEYQQQWPVYMRELQGRYSDS
TIEALEILHDDDKIDLNLIVALIKHIVFSGEDGAILVFLPGWDNISTLNDLLTAQPMFKS
DRFVIIPLHSLMPSVNQTEVFKKPPPGVRKIVIATNIAETSITIDDVVHVIDGGKIKETH
FDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGSCYHLYNGLRESLLDDYQLPEIMRTPL
EELCLQIKILHLGQIAQFLEKAMQPPSKEAVHLAVTHLKELNALDRNEELTPLGVHLARL
PVEPHIGKMILFGALLCCLDPVLTIAASLSFKDPFVIPLGKEKVADAKRRELSKQSRSDH
LTVVNAFKGWEEAKRRGFRSEKDYCWEYFLSPNNLQMLHNMKGQFAEHLLVAGFVSSKNP
KDPKANINSENEKLIKAVVCAGLYPKVAKIRPSFSKKRKMVKVFTKSDGRVNIHPKSVNA
EEGEFQHSWLIYHLKMRTSSIYLYDCTEVSPYSLLFFGGDISIQKEQDQETISVDEWIVF
QSPSRIAHLVKDLKKELDTLLQEKIKKPRPVDWNNRSKDYAVLSAIIDLITTQDDTGTKN
YAPRFQSD
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgggtggccgcagggactggcggtccggtggcggctcttcggccgccggagga
tgggacaacagctcgaggggaggcggaggaggtggcagtggccgcggccggcacccgggc
catctgaagggaaaagaaatcgggctgtggtacgcgaagcggcagggccagaagagcaag
gaccaggagcgtaaagagagggctgtagtgcatatggatgaaaagcgagaggagcacatc
acccgactactgaactcagtccaggcatgcagtgacaacaaagaccagcgctcgtcgctc
tcggctgacttgagcatgaactggagaaatccaagttcgtccacttcagtcaagaaggaa
tttaaaccagagaccagtgctgacctggagtacctctttgaaacggttacgcgggatgtg
ttcttggatgaggagctgagggaagacctttcgaagaagatgacaagttcaagatacctg
gagatgaagaaatttcgggaaaaacttccctcctacaccatgaaacatgaggtggtagac
ttgatcagcacgaatcaggtggttgtcataagtggagaaacgggttgtggcaaaacgacg
caggtaacgcagttcattctggacgactacatcgagagaggaatgggctcgctgtgcaga
gttgtgtgcacccagccgcgtcggatcagtgccatatctatcgctgagagagtggcagca
gaaagagctgaagtttgtggtgaaggaaacagcactggctaccagattcggttacaaagt
cgctttccacgcaaacaaggttccattttgtactgcactacaggaattgttctccagtgg
cttcagtcagattcgcttttgtccaccatcagccaccttgttttggatgaagttcacgag
aggagcttgcagtccgatgtgctgatgaccatcgtgaaggatgttttggctttcagatcg
gatttgaaagtgatactgatgagcgcaacactcaatgctgaacagttttcagagtatttc
aggagctgcccaatgctgcatatcccagggtttaccttcccagtgaaagaatacattttg
gaggatgttattgagttacttaactatcgtccacaaggccaggaagttcgaaagccatcc
tctaggagaaggttcatgcaaggctgcatgtttcgaccagagaaagaacaagttgaagaa
gaataccagcaacagtggccagtgtatatgagagagttgcaaggaaggtattctgacagt
acaatcgaagccttggaaattctgcacgacgatgataagatagacctaaatctgattgtg
gctctcataaagcatattgttttctctggggaggatggtgccatcttggttttccttcct
ggctgggacaatatcagcaccttgaatgacctgctaactgcacaaccaatgtttaaatca
gatcgttttgtgatcattccccttcactcgctgatgccttcagtgaatcagacagaggtt
ttcaagaagccacctccaggagttcgcaagattgtaattgcaactaacattgctgagaca
agtatcaccatagatgacgtggtccatgtgatagatggggggaagataaaggagactcac
tttgacactcaaaacaatatcagcacgatggctgccgagtgggtcagcaaagcgaatgcc
aagcagcggaaaggtcgagctggaagggtacagccaggttcctgttaccacttgtacaat
ggattgcgagagagcctgctggatgactatcagttacccgaaatcatgaggacgccactt
gaagaactttgcttacagatcaagattttgcatcttggtcaaattgcccaattcctggag
aaggcgatgcagcctccatcaaaggaagcagttcacctcgctgtgacccacctcaaagag
ctgaacgccttggataggaacgaagagctcacgccacttggcgtccatttagcccggctg
ccagtggagccccacattgggaagatgattctgtttggggcgttgttatgctgcttggat
cctgtgctcaccattgcagccagtctgagcttcaaggatccatttgtcatcccattgggt
aaagagaaagtggcagatgcaaaacgtcgagagttgtccaagcaatcccgtagcgaccat
ctgactgtagtcaatgcatttaagggatgggaagaagcaaaaagacgaggtttccgatca
gagaaggattactgctgggagtacttcctttctccaaacaacctccagatgcttcataac
atgaaaggacagtttgctgaacacctgctggtggctggctttgtcagcagcaagaatccc
aaagaccccaaggcaaacatcaactcagaaaacgagaagctgatcaaagctgtggtgtgt
gcaggcctgtatcccaaggtggcaaaaatccggccgagcttcagcaagaaacggaaaatg
gttaaagttttcaccaagtcggatgggcgagtcaacattcacccgaagtcggtgaatgca
gaggaaggggaatttcagcacagctggctgatctaccacctgaagatgcgaacaagcagt
atctacctgtatgattgcactgaggtatccccttattccctccttttctttgggggtgat
atctcgatacagaaagaacaagaccaagagacgatctctgtcgatgaatggattgtattc
cagtcaccgtccagaatagcccatttagtaaaggacctgaagaaggagctggataccctt
ctgcaagagaagattaagaagccacggccagtagactggaacaaccgctcgaaagactat
gcggtcctgtcagcgatcatagacttgataaccacgcaagatgacacgggcaccaagaac
tacgcgcctcggttccagagcgactga
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