Hemitrygon akajei (red stingray): 140725909
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Entry
140725909 CDS
T11019
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140725909 (msx1a)
Transcription factors [BR:
haka03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
140725909 (msx1a)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
140725909
NCBI-ProteinID:
XP_072897945
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Position
4:54830865..54832236
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AA seq
293 aa
AA seq
DB search
MQHLKRDRLYMAPCSVMSALQVTTGGVKNEEPRSLSKGIQSAVKLAVDEEMDRPKAPPAL
LPFSVEALMSDRKPSRDSSTSDAPLVGPSQSLSPRATGLPAQETLPTSLPANTSYTVEGL
LKLSEDALVKSESSDRQERTPWIQDSRFSPPPRRMSPPTCTLRKHKTNRKPRTPFTTSQL
LALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKP
MLPPAFGISFPIGTPVPATSLYGASHHFHRPTLPVSPVGLYAAHVGYSMYHLA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatttgaaaagggatcgactctatatggccccttgttctgtcatgagtgctttg
caagtgacaactggcggcgttaagaacgaagaaccccgttctttgagtaaagggatacag
agcgctgtgaaattagcggtggacgaagagatggacagacccaaagcccctcctgcgctt
ctcccatttagcgtggaggcgcttatgtctgacaggaaacccagccgggacagctcaact
tcggacgcaccgcttgttggcccctcgcagagcctgagccctcgagccaccggtttaccg
gctcaggagacgttacctacttctctaccggcgaacacttcctacacggtggaaggactg
ttaaaactatctgaagacgcacttgtcaagtcggagagtagcgaccgacaagaacggacg
ccttggatacaagactcgcggttctctccgcctcctaggagaatgagtcctcctacttgc
accctcagaaagcacaaaaccaaccgcaaacccaggactccattcaccacctcgcagtta
ctggccctggagcgcaagttccgccaaaaacagtacttgtccatcgccgagagagcagag
ttttccagctcacttaacttaacagagacacaggtgaaaatctggtttcagaatcgcagg
gcgaaagccaaacgactgcaggaggccgagctggaaaaactgaaaatggcagccaagccc
atgctaccaccggcttttggaattagttttcctatcggtacgccggtccccgcaacatct
ttgtatggagcttcccaccactttcacagacccactctaccagtatcgccagtcggacta
tatgctgctcacgttggatacagcatgtaccatttagcctga
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