Hemitrygon akajei (red stingray): 140725921
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Entry
140725921 CDS
T11019
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140725921 (chd7)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
140725921 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
CHDCT2
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
HDA2-3
Motif
Other DBs
NCBI-GeneID:
140725921
NCBI-ProteinID:
XP_072897955
LinkDB
All DBs
Position
1:complement(40589479..40817676)
Genome browser
AA seq
2984 aa
AA seq
DB search
MADPGMLSLFGDDGNIFSEGLEGLGECGFSENPVNALGQQLPMDQGFGSMQSPLHHPPPT
QTQTKLTHYDHFGPFEQQKIHLVDQPNRMIGNTPGNGMASPHSQYHNPSVPPVPHSGAQM
GVYPTMQNERCGQQFVDSSSMWGPRAVPVPDQTRPAFQQQQQQQPPPQGQAHAQHMQQMG
NYLTRSDYSLQQHNQPQQQRVNQFTQAQEALSQGNPFMGTSGPGPLSRMPQQTPNMGPSL
RHTPSQQYHPHPPPPNTLHGDSIAHSPRFSPSPSQQASSRQQNLNFTSRSQAVPSQSVSS
SGQYSQYPYSNINQGLVNSNTGINQNLGLNNNPSVNQAIPRYPNTVGFPAGTSQGLMHQQ
PIHPSGPLNQINAQTMHPTQSQGTYASPSPMSPMKAMNNPAGTPPPQVRPGSAGMQLEVG
SYPNMSLPQQPHQSPGTMGLGQRSMGPRSIQTPQYMSPSVPRDIGSLPRPVGALGPSGNH
TDQVMQERIMSGQQHPNQPFQPQLPTCPPVKQHPTVHHQTSPSPHQHQPWVQSQHSSPKA
TSQQVSAQHQLLSNTLADTQSDMTQISGQNSQLATGEERQKSLDQQRMQEKANRIVAEAI
AKAKARGEQNIPKVIDQLVISSTAVDNSTEEKKKKKKPKEKKDPKESKEAKEKKPKSTAT
TKIKSNKNASNKKNMPESTVGKKKGKRKHESSPENSDMDKTPPPSPQEEDELGVQKRRSS
RQVKRKRYTEDLEFKISDDDDAGKDSPLNTSQSEQDASTGPVTEKIMSMRIVKKTTESGE
EVEVEELFVKYKNYSYLHCQWTTVEQLAKDKRIHQKIKRFKAKQAQMNKFLTEVEDEPFN
PDYVEVDRILDVSHSIDKDSGEPVTHYLVKWCSLPYEESTWELKLDTDQDKIEEFQQLQA
MTPRTEYMERPRPEFWTKLEHSRDYKNGNQLREYQLEGVNWLLFNWYNSQNCILADEMGL
GKTIQSITFLYEMYLKGIQGPFLIIAPLSTITNWEREFRTWTAMNVAVYHGSQASRQMIQ
AYEMYFRDAEGRIIQGAYKFHAIITTFEMILTDCPELRNIAWRCVIIDEAHRLKNRNCKL
LEGLKLMDLEHKVLLTGTPLQNTVEELFSLLNFLEPSRFPSETNFLQEFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILERNFAFLSKGAGQTN
VPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNPDAPDFQLQAMIQAAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRHLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRENSANGMQQLSKKEIEDLLRKGAYGALMDEED
EGSKFCEEDIDQILLRRTHTITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKK
AELDIDAINGRNNLVIDTPRVRKQTRHYNAIKEDELMEFSDLESESEEKTGKPRRPQDRS
HGYPRTECFRVEKNLLVYGWGRWSDILSHGRFKRQLTEHDVETICRTILVYCLNHYRGDE
KIKGFIWDLITPTEDGQTRALQNHSGLSAPVPRGRKGKKVKSQSTQPIMKNADWLSSCNP
DILLHDDGYKKHLKHHCNKVLLRVRMLYYLRQEVIGDVADKIFDGADASDIDIWIPEIDH
GELPTDWWDREADKCLLIGVFKHGYEKYNSIRADPLFCFLERVGMPDAKAMAAEQRGTDV
LADVSDGVDFDREEEDPEYKPGRIPFKDEMDEFENSPQDDKDECVDTVNTDKQPDQDDES
DKLYWPSTSVLTTRLRRLITAYQRSYKREQMKLEALNKSDRRRRRPRDEVRAREAERNAA
ISEKRQRWTRREEADFYRVVSTFGIVFDPTKKQFDWSQFRAFARLDKKSDDSLEKYFSSF
VTMCRKVCRMPPNPDEEPDSTIFIEPITEERASRTLYRIELLRKVREQVLLHAQLDERLK
LCQPSMDLPEWWECGKHDKDLLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNKGANQ
RISTPFQNQPTCVSQVSSVAPATPVPEEKCTEQTDNDDSKTEGELKSPLPTVQAEQSAEL
SKDDGESNCAENIQIDSDCQNTSEPLSVKVEHDANDTSALGTKMLAESEEKEFRPKLPFE
KGSEDDDDEEEDDDDIDDKSEESSQPEAGTISQGKHFDEESIASLSTARDETRDGFFMED
SEPTVAQLLHERTYSFSFWPKDRVMINRLDNICEAIIKGKWPINRRQPFDFHGIISYTPT
SVESPLPRRSFTELSIVGQGSFSTCEDIAGSPQVSRDDAMNLSVPRQRRRRRKKIEIEAE
RAARRRNLMEMVAQLRESQAASDSGQERAVDLSKASREARSSTSVSNPSVNPKYVLPNAS
VPVSDAYKAHVEMLQAGLSRTPTGLMINGSLVDGEMPIKRRRGRRKNVEGLDLLFMNNKR
TTLNADDAEVAKAFEESMQTASQLRNIPSPGQLDPEAHIPVVNLEDGTRLVGEAAPKNKD
LVEWLKVHPAYTVDMPSYVPKSGEVLLTPFQKPKQKRHRCRNPNKLDVNTLTGDERVPVV
NKRNGKKMGGAMAPPMKELPRWLEENPEFAVAPDWADVVKQSGFLPESMFDRVLTGPVVR
EEGASRRGRRPKSEIAKAAVAAAASASGINPLLMNSLFAGMDLASLQNLQNLQSLQLAGL
MGFPSGLATAATGGDTKNPASLLPLMLPGMAGLPNMFGLGSLLSNPLTATASTSSAAPGP
SESGISSKTENDKENDKENEDKEINSAESAVDSNSASSSSFTATATTGLSNNPLAFNPFL
LSTMAPGLFYPSMFLPPGLGMTLSGFPPTTLAGLQSTVSSSEDKEDKTDGKTEDSSFIEG
EANSDDSDPVGSPSKPADSSLVEDELVQATGLDSVEGEEEEDED
NT seq
8955 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctggtatgctgagtttgtttggtgatgatgggaacattttcagtgaaggg
cttgaaggtctcggagaatgtggtttctcagagaatccagtgaatgctcttgggcaacaa
ctaccaatggatcaaggatttggctccatgcagtctcccctccatcatcccccacctact
cagactcaaactaagctgactcattatgatcattttggtccgtttgaacagcagaaaatt
catctagtagatcagcctaaccgaatgattggtaatactcctgggaatggcatggcatcg
cctcattcacaataccacaatccctcagttccaccagtccctcacagtggagctcagatg
ggagtatacccaactatgcagaatgaaaggtgtggacagcagtttgtggacagcagttcc
atgtggggaccacgagctgtcccagtgccagaccagacacgacctgccttccagcaacag
cagcagcaacagccaccacctcaggggcaagcacatgctcaacatatgcaacagatgggg
aattacctgacgcgtagtgattattctttgcaacagcacaaccagcctcagcagcagagg
gtgaaccaattcactcaggcacaagaggctcttagtcagggaaatcctttcatgggaact
tcagggccaggtcccttatcccgcatgccacagcaaactcccaacatgggcccttccttg
cgtcatactccatcacagcaataccacccccacccccctccaccgaatactctccatggg
gattccattgctcacagtcctagattttcccctagtccttctcagcaagccagtagcagg
cagcaaaacttaaattttacttcacgtagccaggcagtaccttcacagtctgtaagtagc
tcagggcagtattcacaatatccttatagtaacattaatcagggattagttaacagtaat
acagggatcaatcaaaacctaggccttaataataacccatctgtgaatcaggcaataccc
cgctatccaaatactgttggattcccagctggaaccagccaaggattaatgcaccagcag
cctatacatccaagtggtccacttaaccaaattaacgcacaaactatgcacccaacacag
tctcagggaacatatgcttctccatctccaatgtcacctatgaaagctatgaataaccca
gctggtacccctccaccacaggttaggccaggtagtgctggaatgcagcttgaagttgga
agctatccaaacatgtctctcccacaacaaccacatcagtccccaggtaccatgggactt
ggacagaggagtatgggtcccagaagcattcagacaccacagtacatgagcccttctgtg
ccacgtgatattgggagccttccaagaccagtcggcgcattgggtcccagtgggaatcat
acagatcaggtgatgcaggaacgcatcatgtctggccaacagcacccaaatcagcctttt
cagcctcagttgccaacttgtccaccagtgaaacaacatccaacggtgcaccatcaaact
tctccttcacctcatcagcatcagccatgggtacagtcacagcattcatcacccaaggct
acttcgcaacaggtgtctgcccaacatcagttgctttcaaatacattggctgatactcag
tcagacatgactcagattagtgggcaaaactctcaattagcaactggagaagaacgacaa
aagtcactggatcagcagcgaatgcaagagaaagccaatcgcattgtagctgaggccatt
gctaaggctaaagctcggggtgagcaaaacattcccaaggtgattgaccaactcgtaatc
tctagcacagcagtggataattcaacagaagagaaaaagaaaaagaaaaaaccaaaagaa
aagaaagaccccaaggagtccaaagaagcaaaggaaaagaaacccaagtcaacagcaacc
actaagatcaaaagtaacaagaatgcaagcaacaagaaaaatatgccagaatcaactgtt
ggaaagaaaaaaggaaaacggaaacatgaatcttctcctgaaaattcagatatggacaaa
acaccacctccgtcaccacaggaagaggatgaattgggagtgcagaaacgtcgctctagt
cgacaagtgaaaagaaaacgatatacggaggatttagagtttaaaatatctgatgatgat
gatgcaggaaaggattctccattaaacacttcgcaatcagaacaggatgcgtcaactggt
ccggttactgagaagatcatgagtatgcgaatagtgaaaaaaacaaccgagtctggagaa
gaagttgaagtagaagaactatttgttaaatacaaaaactattcctaccttcattgtcag
tggaccactgtggagcaactggcaaaggacaagagaatccatcagaagattaaacgcttc
aaagcaaagcaagcacaaatgaataagtttctcactgaggttgaggatgagccttttaat
ccagattatgtggaagtggatcgaatacttgatgtctcacatagcattgataaagatagt
ggagagccagtcacccattatttggtgaagtggtgttctcttccatatgaagaaagcacc
tgggaactgaaacttgacacagaccaagacaaaattgaagaatttcagcagctacaagcc
atgacaccaagaacagagtatatggaacgaccacgtccagaattctggaccaagttggaa
cattctagagattataaaaacggcaatcaactcagggaataccagctggagggcgtaaac
tggctactcttcaattggtacaacagccaaaactgcattttggcagatgaaatgggatta
gggaagactattcagtctattacatttctgtatgaaatgtacttgaagggaattcaaggc
cccttcctgattattgcacccctttccaccatcactaattgggagagggaattccgcact
tggacagcaatgaatgtggccgtgtaccatggcagccaggctagccgccaaatgattcag
gcatatgagatgtatttccgggatgctgagggtcgtataattcagggagcatacaagttc
catgccatcatcacaacatttgaaatgattttaactgattgcccagaactccgcaatatt
gcatggcgctgtgtgataattgatgaagcccacagactaaagaacagaaactgcaaactt
ttggaaggactaaagctaatggatctggagcacaaggtactgctgacagggacaccatta
caaaacactgtagaagaacttttcagtttgctgaatttcttggaaccctctagattcccc
tcggagactaacttcttgcaagagtttggtgatttgaaaactgaagaacaggtgcaaaaa
ctccaagctattctgaaacctatgatgttaagacgcttgaaggaagatgtggagaaaaat
ttggctccaaaagaagaaaccataattgaagtagaattgaccaacattcaaaagaaatat
taccgagctattttggagagaaacttcgcttttctctctaaaggagccggtcaaactaat
gtgccgaaccttctgaataccatgatggaattgagaaaatgttgtaatcatccataccta
attaatggtgctgaagagaagattttggaagaatttaaagaaactcataatcctgatgca
ccagattttcagcttcaagctatgattcaagctgctggtaagctagtgctgattgacaag
ttgctgccaaaactgaaggctggtggccacaaggtgcttatattttcccagatggtgcgc
tgcttggatattcttgaggactacctcattcagagaagacacctgtatgagcgcattgat
ggtcgtgtgagggggaatcttcgacaggcagcaatagatcgtttctcaaaacctgactcg
gatcgttttgttttcctgctctgcactcgtgctggaggtttagggattaaccttactgct
gctgacacctgcatcatctttgattctgactggaacccacaaaatgatctccaggctcaa
gcccgctgtcacagaattgggcaaagtaaagcagtgaaagtatatagattaataacaagg
aattcttatgaaagagagatgtttgataaagccagtcttaagcttggattggacaaagct
gttctacaatcaatgagtggacgagaaaatagtgctaatgggatgcagcaactctccaaa
aaggaaattgaggatcttctgaggaaaggagcatatggtgccctgatggatgaagaagat
gaagggtcaaaattctgtgaggaagatattgaccagattcttttaagacgtactcataca
attactatagagtctgaaggaaaagggtctacttttgccaaggctagctttgtggcttca
gggaatagaacagatatttcccttgacgatcctaacttttggcaaaagtgggcaaagaaa
gcggaactggatattgatgcaataaatggaaggaacaatttggtgattgatacgccaaga
gtaagaaagcaaacaagacactacaatgctatcaaggaagatgaactaatggaattttcc
gatttggaaagcgagtctgaagaaaaaactgggaagcctcgtagaccacaggacaggtcc
catggttatccaaggactgagtgttttagagtggagaagaacctgttggtatatggttgg
ggccgatggagtgacatactatcacatggtcgttttaaacggcagttgacagaacatgat
gtggagaccatctgccgcactatccttgtgtactgcttgaaccattacagaggagatgag
aagatcaaaggatttatatgggatctgattactcctactgaggatggacagactcgagcg
ctgcaaaaccactcgggtttgtctgcgccagtgcctagagggaggaaaggaaagaaagtt
aaaagccagtccactcagccgatcatgaaaaatgctgattggctttcgagctgcaaccca
gatatcttgctgcacgatgatggttacaagaaacaccttaaacaccactgcaacaaagtc
ctactgcgggtgcggatgctgtattatttgaggcaggaagtgataggcgatgtagcagac
aagatatttgatggtgcagatgcaagtgatatagatatctggatcccagaaatcgatcat
ggtgaacttcctacagattggtgggatcgggaggctgataaatgccttcttattggagta
tttaaacatggctatgaaaagtacaattctataagggcagatcctttattctgtttcctg
gagcgagtaggaatgcctgatgcaaaggccatggctgctgaacagaggggaacagatgtg
ctggctgacgttagtgatggtgttgattttgacagagaagaagaagatccagaatataaa
cctggccgaattccattcaaagatgaaatggatgaatttgagaattcaccacaagatgac
aaggatgaatgtgtggatactgtgaatacagacaaacaacctgatcaagatgatgagtcg
gataaactctattggcccagcacctcagttctaacaacacgcctgcgccggcttatcaca
gcttatcagcgcagttacaagagggagcagatgaaattagaagcactaaacaaaagtgac
cgtcgcagacgtcggccaagagatgaagtgagagctcgggaggcagagagaaatgcagcc
atatctgagaagcgtcaaaggtggactaggagggaggaggcagacttctaccgtgtagta
tcaacctttggtatagtttttgatccaacgaagaagcaatttgactggagccaattccgt
gcctttgctagactggataaaaagtctgatgatagtttggaaaagtacttcagctcattt
gtgacaatgtgtagaaaagtatgtcgtatgcctcctaatccagatgaagaacctgattct
accattttcattgagcccatcacggaagagcgtgcttctagaaccttgtatcgaatagaa
cttctccggaaggttcgagagcaggtgttgctccatgcacaattggatgagcgactcaag
ttatgccagccaagcatggacctgcctgaatggtgggagtgtggcaaacatgacaaagat
ttattgattggtgctgcaaagcatggagttagcaggacagactatcacattttaaatgac
cctgagctttctttcctggaggcccataaaaattttgctcaaaacaaaggggccaaccag
cggatcagtacacctttccaaaaccaaccaacttgtgtgagccaagtatcctctgttgct
ccagccacaccagttccggaagaaaaatgtacagaacaaactgataatgatgatagtaaa
actgaaggtgaattaaaaagtcctttaccaacagtgcaggctgagcaaagtgcagagctt
tctaaggatgatggagaatcgaattgtgcagagaacatacaaattgattctgattgtcag
aatacctcagagcccttatctgtgaaagtggagcatgatgctaacgatacttcagccctg
ggtactaaaatgcttgctgagtctgaggaaaaggaattcagacctaaattaccatttgag
aaagggtcagaagatgatgatgatgaggaggaggatgacgacgatattgatgataagtcg
gaagaatcatcccaaccagaagctgggactatttctcaaggcaagcattttgatgaagaa
agcattgcttctttgagcactgctcgcgatgaaactcgtgatgggtttttcatggaagat
agtgaacccacagtagctcagctacttcatgaaagaacatattccttctcattctggcca
aaggatcgagtaatgattaatcgtttggacaacatatgtgaagcaataatcaagggaaag
tggcctataaataggcgtcagccatttgattttcatggtataatcagctacacccctact
tcagtggaaagccctctgccaaggaggagttttactgaactctccattgttggtcaaggg
agcttcagtacctgtgaagatatagcaggttctcctcaggtgtcaagggatgatgcaatg
aacctgtcagttccaagacaacgcaggagacgacgaaagaagattgaaatagaagctgag
cgagctgcaagacgaagaaatctgatggagatggtggcccagcttcgtgagtcccaggca
gcctcagatagtggacaggaaagagctgtggatttatcaaaagcctccagagaggcaaga
agttctacctcagtcagtaacccttctgttaatcccaagtacgttttgccgaatgcctct
gtgccagtatcagatgcctataaagcccatgttgaaatgctgcaagcaggcctttcacga
acaccaactggacttatgattaatggttcactagttgatggggaaatgccaataaaaagg
agaagaggaaggaggaaaaatgtggaggggcttgatctcttatttatgaacaacaaacgg
acaacattaaatgctgatgatgcagaagtggccaaagcttttgaagagagcatgcagaca
gcatcacaactaagaaacattccatctcctggtcaattggacccagaggcacacatacct
gttgttaacttggaagatgggaccaggcttgtaggcgaagctgcccctaaaaataaagat
ttggtggaatggctgaaagttcacccagcttatacagtggatatgcctagttatgtacca
aagagtggagaagtgctgttgaccccatttcagaaacctaaacagaagaggcatcgctgc
agaaatccaaacaaactggatgttaacactttgacaggagatgaaagagtgcctgttgtt
aacaaaagaaatgggaaaaagatgggtggtgccatggccccaccaatgaaagaattgcct
agatggctcgaagaaaaccctgagtttgctgtcgcacctgattgggctgatgtagtcaag
caatctggatttttaccagagtccatgtttgaccgtgttctcactggaccagttgttcga
gaggagggagcaagtaggaggggaagacggcctaagagtgagattgccaaggctgcagtt
gcagctgctgcttcggcttcaggaataaacccactactgatgaacagtctttttgctgga
atggatcttgcaagcctgcagaacttacaaaacctgcagagtcttcagttagctggattg
atgggcttcccatcaggcctggctacagctgctacaggaggagatacaaaaaatcctgct
tcattactaccactgatgctcccaggtatggcaggactacccaatatgtttggactagga
agcttgttaagcaaccccttgactgctacagctagtacttcttcagcagcgccaggtcca
agtgaaagtggtatttcatctaagacagaaaatgataaagaaaatgataaagaaaatgaa
gataaagaaataaacagtgccgaatctgcagttgattctaatagtgcaagttcgagctct
ttcacagctactgcaaccactggactgtccaacaatcctctagcattcaacccattcttg
ctttccactatggctcctggattattctacccgtctatgtttcttcctcctggcttggga
atgaccttgtctgggtttcctcctactacactggctggactgcagagcactgtaagctca
agtgaggacaaggaggataagacagatggcaaaactgaagacagcagttttattgaagga
gaagccaattcagatgacagtgatcctgtgggaagcccaagtaagccagcagattcgtct
cttgtggaagatgaattggtacaggcaacagggttggactcagttgagggagaagaggag
gaagatgaggattaa
DBGET
integrated database retrieval system
