Hemitrygon akajei (red stingray): 140726230
Help
Entry
140726230 CDS
T11019
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04010
MAPK signaling pathway
haka04210
Apoptosis
haka04218
Cellular senescence
haka04620
Toll-like receptor signaling pathway
haka04621
NOD-like receptor signaling pathway
haka04622
RIG-I-like receptor signaling pathway
haka04623
Cytosolic DNA-sensing pathway
haka04625
C-type lectin receptor signaling pathway
haka04920
Adipocytokine signaling pathway
haka05132
Salmonella infection
haka05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
140726230
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
140726230
04218 Cellular senescence
140726230
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140726230
04621 NOD-like receptor signaling pathway
140726230
04622 RIG-I-like receptor signaling pathway
140726230
04623 Cytosolic DNA-sensing pathway
140726230
04625 C-type lectin receptor signaling pathway
140726230
09152 Endocrine system
04920 Adipocytokine signaling pathway
140726230
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140726230
09171 Infectious disease: bacterial
05132 Salmonella infection
140726230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140726230
Transcription factors [BR:
haka03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
140726230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
140726230
NCBI-ProteinID:
XP_072898422
LinkDB
All DBs
Position
4:complement(35891452..36016701)
Genome browser
AA seq
946 aa
AA seq
DB search
MAEEGNYRMNNIYIDDYTAALDISGVMFNPASGAADTPLHTPDGPYLQILEQPKQRGFRF
RYGCEGPSHGGLPGASSEKNKKTYPAVKICNYVGHAKIVVQLVTSGRDTVHLHAHSLVGK
QCEKGICVVQVGPKEMTTTFPNLGILHVTKKNVASTLEQRMMQAYLMGYNNGVVIHPELN
HRHTDGYGQIELTEREKELIHSASIQQAKEMDLSVVRLMFTALLPDSSCRFTRKLEPVIS
DPIYDSKAPNASNLRIVRMDRTAGCVSGGDEVYLLCDKVQKDDIQVRFYEEDENGGIWEA
FGNFGPTDVHRQFAIVFKTPKYRDVDISKPASVFVQLRRKSDNETSEPKPFTYYPLIKDK
EEVQRKRLKLLPNFSDHFGGGAGSGGGLYGGGGGAGGGSNYFTGFQGYANFGNYAYPPGT
TNSSPGMKHAAVEPGQSLSESSPSPRVGQPPEESSTSSHQPTTQPGDTSTEADVTSPRLN
QQPQDPNLLFLEKALDLAERHARALLDYSMSGDARMLLAVQRHLTAAQDQNGDAALHLAI
IHLQPSVVQHLLHVIVSLPGQDIINMRNDLYQTPLHLAVITGQAEVVELLLQAGADPTLL
DCHSNSVLHLAAEQGDVKVLSVLLRGKNKAVMDLLPLPNNAGFSAIHLAVLANSLSALRQ
LLAAGADVNTPEQRSGRTALHLSVEQESISLVGNLLLEASTDVDATTFDGSTALHIAAGR
GSTKLCALLMAAGADPLIENHEPLDDRSDEHLEDTDDEGIFRGTTPLDMSATEEVYDILT
GKPYQSKAESVAPFPQGDLGQLDIETRLELCKLLEVTEPGLNWMTLAQKLGLGILINVFK
LSHSPAKSLLDNYEVSGGTQMEILESLKTMGYREAVAVLAKAMAKSATTKVNEELNSSSL
AEQNTLQVDAKSQDCDSVYDSGVETSFRKLSHLTSESFNNETSLKM
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagagggcaactaccgtatgaacaatatctacattgacgactacacagcagca
ctggacatctccggagtcatgttcaaccctgccagtggtgctgcagacacgcctctacac
acacctgatggaccttatcttcagattctcgagcagcccaaacagagaggatttcgtttc
cgctatgggtgtgaaggtccatcacacggaggactacctggggcttccagtgagaaaaac
aagaagacctatcctgctgttaagatctgtaactacgtcgggcacgccaagatagtggtt
cagctggtgacctctggtcgggacacggttcacctccacgcacacagcctggtgggcaag
cagtgcgagaaggggatctgtgtggtgcaggttggccccaaggagatgacgacaacgttc
ccaaaccttggcatcctccacgtgaccaagaagaacgtggccagcactctggagcagaga
atgatgcaggcctacctgatgggttacaacaacggtgtggtgattcaccccgagctcaac
caccgtcacaccgatggctacggccagatagagctgacagagcgggagaaggagctgatt
cacagtgcgtctatccagcaggcgaaggaaatggatctgagtgtggtccgcctcatgttc
accgccctcctgcccgacagcagttgccggttcacccgcaagctggagcctgtcatctcc
gaccccatctatgacagcaaggcaccgaacgcatcgaacctgaggatagtacggatggat
cgaacggctgggtgtgttagcgggggcgatgaggtctacctgctttgtgataaagtccag
aaagatgacatccaagttcgcttctatgaagaggatgaaaatggagggatttgggaagca
tttgggaactttggtccaacagatgttcatcgacagttcgctatcgtctttaaaactcca
aagtaccgggatgtggacatttccaagcctgccagtgtgtttgtccaacttcgcaggaaa
tccgacaacgagacaagtgaaccaaagcccttcacgtactacccgctaattaaagataag
gaggaagtacagaggaaacgactgaagcttttgccaaatttctcagatcactttggaggt
ggagcagggtcaggtggaggactttacggaggagggggtggagccggtgggggttccaat
tacttcacaggatttcaaggatacgccaactttggaaattatgcttaccctccaggaacc
accaactccagtccgggcatgaaacatgctgcagtggagcctggacagtccctatcagag
agctctccgtctccccgtgttggacagcctccagaggagagctccacgtcttcccaccag
cccaccacacagcctggagacacctcgacagaggccgacgtcacctcccccagactgaac
cagcagcctcaggacccaaatttgttgttcctggagaaagctctggacttggcggagagg
cacgcgagagccctactggactactcgatgtcgggagacgccaggatgttgctggcggtg
cagcgtcacctcactgctgcccaggaccagaacggagacgcggcactacatctagcaatc
attcacctccagccatctgtggtgcaacatcttctgcatgtaatcgtcagcctccctggc
caggacatcatcaacatgagaaacgatctctatcagactccgctgcacctggctgttata
actgggcaggcggaggtggtggagctgttgctgcaggccggggctgatcccaccctgctg
gactgccacagcaactccgttcttcacctggccgcagagcagggggatgtcaaggtgctc
agtgtgctgctgagaggaaagaacaaggctgtgatggatcttctaccccttccaaacaac
gcagggttcagtgccatccacctggcagtgttggccaacagcctgtctgccctgaggcag
ctgctggcagctggagcggatgtgaacaccccggaacaacgctcagggcgcaccgcactg
cacctttccgtcgaacaggagagcatctcgctggtcggaaaccttctccttgaggcgagt
acagatgttgatgcaaccacatttgatggatcgaccgctcttcacatagctgcgggaaga
ggctcaaccaaactttgtgccttattgatggcagcgggtgcagacccactaatcgagaac
catgaaccgctggatgacagaagcgatgaacacctcgaagataccgatgacgaaggaatc
ttccgtggaaccacacctctggacatgtcggccacagaggaggtttatgacatcctaaca
ggcaaaccgtaccaatccaaagctgagtctgttgctcctttcccacaaggtgacctagga
caactggacatagaaacgaggctggagttgtgcaaactactggaagtgactgaaccaggc
ctgaactggatgactctagcacagaaactgggtcttggtatcttgattaatgtctttaaa
ctcagccattctcctgcaaaatccctgctggataactacgaggtatctggtggtacacag
atggagattctggaatcactgaagaccatgggttacagagaagcagtggcagtacttgct
aaagcaatggccaaatcagcaaccacaaaagtgaatgaagagttgaattcatcatccctt
gctgagcagaacactctacaggttgacgccaagtcccaggactgtgacagcgtgtacgac
agcggtgtggaaacctcatttaggaaactcagccatctgacatcggagtctttcaacaac
gaaacttctttgaaaatgtga
DBGET
integrated database retrieval system
