Hemitrygon akajei (red stingray): 140726278
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Entry
140726278 CDS
T11019
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140726278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
haka04990
]
140726278
Domain-containing proteins not elsewhere classified [BR:
haka04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
140726278
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PNM8A
Motif
Other DBs
NCBI-GeneID:
140726278
NCBI-ProteinID:
XP_072898546
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Position
4:complement(41485433..41733069)
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AA seq
820 aa
AA seq
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MSNYTVSLVGPAPWGFRLQGGRDFNMPLTISRLSEGWGKLRRPVLRLEMWFCPLMGSARR
GWLIWQRRTLIKACTGSLKLSLQRAAPPPKSAPTTVQKPRAYNTPINLYSSDNAFEVAEG
QKRGLRDGQSDAKPQNGSPRRIVTGAHPDIHHNFSDQSKKRLMQDTEDWQPKTGTAQSRS
FSILAQMTGTEHSVTPVSETSKKTRDDAAENEETGYSIVENVEPPQIVCTSQLVDEEDHG
TCSASSPRMRSVTTQTAESPTPQASEPGEGVAGPDTTVESLPSDRDESKLSLPAPAPVTS
LAAQDHPISPSSGLSPSYYLSTPPPFRKICLDNPLDALPKSAPHPPPVRCDPKANTYLAS
LSVVKISKARFFEGMNTEVSVMPSDPPRILPSATGDKQHSVDSGKHSVAMQTCDVLDEPC
PAPAPVRDTDPSIIISPVSKRTIVGNPLEALPKAAPRVPVVKRSPLARIAASTITAVLAA
QARLSDPVVSRSLLDALLITPIIKPPAHSKQPKCLSTSSPCTQKDKSGEQPELLQPIGPA
TASVKPMSKPSGVCRTSPAAAGSGPTFKPLGVPGAAKTTVWQPGNSAVNSVSKTTLPTAH
VSPANSTSNAKVPSTTVDKPPLQDDNTLVQMAEHIPAGNRTPMCAHCNLVIRGPFLVAMG
RSWHPEEFTCAYCSLSLAHIGFVEEKGSVYCEKCYEQFFAPDCARCQRKILGEIINALKQ
TWHVNCFVCVACMQPIRNNVFHMEDGEPYCEKDYYNLFGTSCHGCDFPIEAGDKFLQALG
HTWHDTCFVCAVCCTNLEGQTFFSKKDKLLCKKHAHTVNV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacacggtctctctggttggcccagccccgtggggattcagacttcaaggt
ggcagagatttcaacatgccgctgaccatctccaggctgtcggaaggctggggaaagctg
cgcaggccagtattgaggttggagatgtggttctgtccattgatggggtcagcacggagg
ggatggctcatctggcagcgcagaacattgatcaaggcttgcactggatctctgaaactc
agccttcagagggccgctcctcctcctaaatccgccccaacgactgttcaaaagcccagg
gcgtacaacacgcccataaacctctactcctctgacaatgcctttgaggtggcagaggga
cagaagagaggactgagagatggccagagtgatgccaagccgcaaaatgggtcacccagg
cgaattgtgaccggtgcccatcctgacatccatcataactttagcgatcagagcaagaag
cgcttaatgcaagacactgaagactggcagcccaagacgggcacagctcagtcacgttca
ttttctatccttgcccagatgacaggcactgagcattcggtaacgccagtgagtgagact
agcaagaagacaagagacgatgcggctgaaaatgaagaaactgggtatagcattgtggaa
aacgtagagcctcctcaaattgtatgcaccagccagctagttgacgaggaggatcacggc
acatgcagcgccagttctccacggatgcgctcggtgaccacgcagaccgccgaaagccct
acaccgcaggcctcagagcctggggagggtgtagctgggccggacaccactgtggagagt
ttgccttctgatagggatgaaagcaagctgtctcttcctgctcctgctccagtgacctca
ctagcagctcaagatcatccaatcagcccgtcgtctggcctgtctccttcctattatctc
tcgactccacctccttttcgaaagatctgcttggacaaccctttagatgctttacccaag
tctgctcctcatccaccgccagtccgctgtgacccaaaggccaatacctacttagcctct
ctttctgttgtaaagatcagtaaagctagattcttcgaaggcatgaacacggaggtctca
gtgatgccttcagaccctccgcgtattctgcccagtgctactggagacaaacagcactca
gtagactctgggaagcattcggtggccatgcagacctgtgatgttcttgatgagccctgt
cctgccccagcgcctgtcagagacacggacccctccattatcatttcacctgtctccaaa
aggacaattgttgggaatccattggaagctttgcccaaagcagccccgcgggttccagtt
gtgaagcggagccctttggccaggattgctgcctccaccatcactgctgttcttgcagct
caggccagactgtctgatcctgttgtatctcgttctctcctggatgctctgctcattact
ccgattatcaagcctcctgcacactctaaacagcccaaatgcttatccaccagttctccc
tgtacacagaaggacaagagtggagagcagcctgagcttctacaacccattggcccggca
acagcctctgtcaagcccatgtcaaagcccagtggagtctgccgcacctcccctgctgct
gctggatctggcccaaccttcaagcccttgggagtcccaggtgcagccaagacaactgtt
tggcaacctggaaactcagcagtgaacagcgtctccaagactacactgccgactgcacat
gtctctcctgccaattccacatccaacgcgaaggtgcccagcactacggtggacaaacca
cccctgcaagatgataacacactggttcaaatggctgaacacatccctgctgggaacagg
acaccaatgtgtgcccattgcaacttagttattaggggcccgtttctggtggccatgggc
cgctcgtggcacccggaagagtttacctgtgcctactgtagcctatcgctcgcccacatt
gggtttgtggaagagaaaggatccgtgtactgtgagaagtgctacgagcagttctttgcc
cctgattgtgcccggtgccaaaggaagatcttgggggaaatcatcaatgccttgaagcag
acttggcatgttaactgctttgtgtgtgtggcttgcatgcagcccattcgaaacaatgtc
ttccacatggaggatggagagccttactgtgagaaagattattataatttatttggcact
agttgccatggctgcgactttcccattgaagccggagacaagttcctgcaagccttgggc
catacttggcatgacacctgctttgtctgtgctgtctgttgtacaaatttagaaggccaa
accttcttctcgaagaaggacaagctgttatgcaagaagcatgctcacacagtgaacgtc
taa
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