Hemitrygon akajei (red stingray): 140726306
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Entry
140726306 CDS
T11019
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04310
Wnt signaling pathway
haka04520
Adherens junction
haka04916
Melanogenesis
haka05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
140726306 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
140726306 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
140726306 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140726306 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140726306 (lef1)
Transcription factors [BR:
haka03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
140726306 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
140726306
NCBI-ProteinID:
XP_072898607
LinkDB
All DBs
Position
4:complement(47537375..47715542)
Genome browser
AA seq
426 aa
AA seq
DB search
MPQLNGGGDPELGANDEMISFKDEGEQEEKILAEISGGEERDLADLKSSLVNESEINPGS
GDSGGSNSREPEVGRRLQVNEDSFRDKVRRPGTEEGKRQDGTMGPAFCGYQPSYIMIPNL
SNEPYVNNGSLSPPGARTSNKVPVVQPCHAVHPLTPLITYSDEHFALGSHPTQIPTDTSS
KRGMHRHPPGPDIPTFYPLSPGAVGQLTPPLGWFSHPMVPTHPGPHTTGIPHPAIENHQI
KQEPIHNEIELMNTKPQHETRKEQEAKKPHIKKPLNAFMLYMKEMRANVVAECTLKESAA
INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYKGKKKKRKREKMQETT
SGHSPKLLLLQPGEQDGLGHRLLRDCQQRCSIISQQKAQVKWAEPDDGSFFPPPEMERLT
SKWCSI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagttaaacggcggtggcgacccagagttgggtgcgaacgacgagatgatttcg
tttaaagacgaaggagagcaagaggagaaaatcctggcagagatcagtggcggcgaagaa
cgggatctcgcggacctcaagtcatcgctggtcaatgaatcggagatcaacccaggcagc
ggagacagcggcggtagcaactcgcgggagcccgaggtgggcagacgattgcaggttaac
gaggattcctttcgggataaagtccgccgtccgggcaccgaggaggggaaacggcaggat
ggaacgatgggtccggccttctgtggttaccagcccagctacattatgatccctaacctt
agcaacgagccgtacgtgaacaacggttccctctcccctccgggcgccagaacgtcaaac
aaggtgcctgtggtgcaaccatgccacgcagttcatcctctaacccctctcatcacatat
agcgacgagcactttgcgctgggatctcatccgacacaaatccccacagacaccagctcc
aagagaggcatgcacagacatcccccaggccctgatatccccaccttctatcccttgtct
ccaggtgctgtcggacagctcacacctcctctcggctggttttcacatcccatggttcct
acccaccccggtcctcatacaactggaattcctcacccagccattgagaaccaccaaatc
aagcaggagcccattcacaatgagattgaactcatgaacacaaaacctcagcatgaaacg
aggaaagagcaggaggccaagaaacctcacatcaagaagcctcttaatgccttcatgtta
tacatgaaggagatgagagcaaatgtggtcgcagagtgtacactgaaagagagtgccgcc
atcaatcagattcttggcagaaggtggcatgctttgtctcgtgaggagcaggccaagtac
tatgaactggctcgaaaggagaggcaactacacatgcagctttacccaggctggtctgca
agggataactataagggaaagaagaagaagaggaaacgtgaaaagatgcaggaaaccact
tcaggccactcaccaaagctcctcctcctgcagccaggagagcaggacgggttggggcac
agacttctccgagactgtcagcaacgctgctccatcatcagccagcagaaagcacaggtc
aagtgggctgagccagacgatggcagctttttccctcctccagagatggaacgcctcacg
tcaaagtggtgctctatatag
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