Hemitrygon akajei (red stingray): 140726385
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Entry
140726385 CDS
T11019
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
haka04515
]
140726385 (pcdh10a)
Cell adhesion molecules [BR:
haka04515
]
Cadherins
Protocadherins
140726385 (pcdh10a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
140726385
NCBI-ProteinID:
XP_072898787
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Position
4:complement(62174328..62250294)
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AA seq
988 aa
AA seq
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MTFLFVLVCILIDRVACQIRYSVPEEQEHGTFVGNIAEDLGLDVTKLAARRFQTVPSSRS
PHLEVNLENGVLFVNEKIDREQICKQSPTCLLHLEVFLENPLELFRVEIEVVDINDNPPS
FPEADITVEISESAGAGTRLPLESAFDPDVGSNSLRTYEITPNSYFYLDVQTQGDGNKFA
ELVLEKNLDREQQALHRYVLTAVDGGLPQRTGTALLSIRVLDSNDNVPVFEQSVYTVSLP
ENAPVGTLVIQLNATDRDEGKNGEVVYSFSNHVSPRVKELFSIEPRTGWIEVKGVIDYEE
SNLYQLYVQAKDLGPNAVPAHCKVLVKVTDVNDNAPEISFSTVSNSVNESANPGTVVALL
SVTDRDSGDNGQLQCEILGQVPFKLKPSFKNYYTIVTDGPLDREVTDSYTITIMAKDRGS
PPLASSKSIKVQVADENDNAPRFSQSSYDVYVTENNVPGAYIYAVTAVDPDVGQNAYISY
SILECDIQGMSVFTYVSINSENGYLYALRSFDYEQLKEFSFTVQARDAGNPPLSSNTTIN
IIIVDQNDNAPSIVSPVSRNGSAREMVPRSAEPGYLVARLVAVDADDGDNARLTYYIAKG
NELGLFRMDWRSGELKTARRLSTTKKAPSAPYELVIEVRDHGQPPLSATATILVMAVDSP
VDRQGERGNRAGTPKENSLDLTLILIIALGSVSFVFLLAMIVLAIRCQKDKKVNIYSCLA
SECCSCCRQARNRKKKLSKSDIMLVQTTNANAAQVSVEEGGFGHHSQNYCYQVCLTPESA
KTDLMFLKPCSPVRSTDAEHNSCGAIIAGYADQQPDVISNGSILSNETKHQRTELSFLVD
RPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRAHNSGADLFSNCTEECKALGHS
DRCWMPSFVPTDSRQGPDYRSNLHVPGMDSVPDTEVYEAPEQPGEKSFSTFGKEKTHPSI
SEKKEYEALLPNTRAPYKPPYLTRKRIC
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcctattcgttttggtttgcattttgatcgaccgcgttgcctgtcagatccgc
tactcggttcccgaggagcaggaacatggcacgttcgtggggaatatcgccgaggatttg
ggattggacgtgacgaagctggccgcccgtaggtttcagacggtgcccagttccagatct
ccgcacctggaggtgaacctggagaacggggtactgtttgtcaacgagaagatcgaccgc
gagcagatctgtaagcagagccctacttgtctgttgcacctcgaggttttcctggagaat
ccgttggaactttttcgcgtggagatcgaggtcgtggatattaacgacaacccgccgagt
ttccccgaggcagacattacggtggagatttcggagagcgccggtgctggtactcggctg
ccgctggagagcgcgttcgatccggacgttggcagcaactcactccgcacctacgagatc
acccccaatagttacttttatctcgacgtgcagacgcaaggagacggcaacaagttcgcc
gagctggtgctagagaaaaacctggaccgagaacagcaagccctccatcggtatgtgctg
acggcagtagacgggggtttgccccagcgcaccggcaccgctctgctcagcatcagggtg
ttggactcgaacgacaacgtacccgtcttcgagcagtcggtttacacggtgagcttgccg
gagaatgcgcccgtcgggaccctcgttattcagctcaatgctaccgaccgcgatgaaggc
aaaaacggcgaggtggtgtactcgttcagcaaccacgtctcccccagggtgaaggagctg
ttcagcatcgagcctaggacgggctggatcgaggtgaagggggtcatcgattacgaggag
agcaacctttatcagctgtacgttcaggcaaaggatctggggcccaacgcggtgccagct
cactgcaaagtgctagtgaaagttactgacgtgaacgacaacgcgcccgagatcagtttc
agcaccgtttccaactcagtaaacgagagcgcaaacccgggcaccgtggtcgctctgctg
agcgtcaccgaccgtgactcgggagacaacgggcaactccagtgcgagatcctgggacag
gtgcctttcaagttgaagccctccttcaagaattactacaccatcgtgacggacgggccg
ctggaccgagaagtcaccgactcttacactatcaccatcatggcgaaggacagaggctct
cctcctctggcctccagcaagtccatcaaggtccaagtggcggacgagaatgacaatgcg
ccccggttctctcagtcttcctacgacgtgtatgtcaccgagaataacgttcccggcgct
tacatctacgcagtaacagccgtggatcccgatgtggggcagaacgcttacatctcttac
tccatattagagtgcgatatacagggtatgtcggtttttacctacgtttccataaactct
gagaatggctatctgtacgccttgcgctctttcgattacgagcagctcaaagagtttagt
ttcacggtgcaggccagagatgcggggaaccctccgctgagcagcaacaccaccattaac
atcatcattgtggaccagaacgacaatgcgccatccattgtatcacccgtgtccaggaat
ggcagtgcccgcgagatggtgcctcgctcagctgaaccgggatacctggtagccaggcta
gtggcagtggacgcggacgacggcgacaatgctcggctcacctattacattgccaagggc
aacgagttgggtctcttcagaatggattggaggagtggagagctcaagacggccaggaga
ctgtccaccaccaaaaaagcccccagtgccccgtacgagctggtgatcgaagttagggat
catggacaaccgccgctgtcagccacggccacaatcctggtgatggcagtggacagcccg
gtggatcgccaaggagaacggggcaaccgagctggcacgccgaaggaaaactctctggat
ctgaccctgatcttgattatcgccctgggctccgtgtccttcgtcttcctcctggccatg
atcgtgctggcaatccggtgccagaaggacaaaaaggtgaacatctacagctgcctggcc
agcgagtgctgctcctgctgcaggcaggcgagaaacagaaagaagaagctcagcaaatcg
gacatcatgctggtgcagaccaccaacgccaacgctgctcaggtgtcggtggaggaaggg
ggctttggacatcacagccagaattactgttaccaagtttgcctgaccccggaatcggcc
aaaactgacctcatgttcttgaaaccatgcagcccagtcaggagtacggacgctgaacac
aactcctgcggggccattattgcggggtacgctgaccagcagcccgacgtcatttccaat
gggagtatattatcaaatgagaccaaacaccagcggaccgaactcagttttcttgtggac
agaccccgtcgagttaacagttctgctttccaagaagcggatatcgtgagctcgaaggac
agcggtcacggtgacagtgaacaaggcgacagtgaccacgatgctactaaccgagctcac
aactctggagctgacctcttttctaattgcacagaagagtgtaaagcattgggacactca
gaccgctgctggatgcccagctttgtgcccacagatagtcgccaaggtccggattaccgc
agtaatttacatgtcccaggaatggactctgtgcctgacactgaggtctatgaagctcca
gagcagcctggtgagaaatctttctctacatttggaaaagaaaaaacacatccctcaatt
tcggaaaagaaagaatatgaagcacttttgcccaacacacgtgcgccttataagccaccc
tatttaacacggaagagaatttgctaa
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