Hemitrygon akajei (red stingray): 140726757
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Entry
140726757 CDS
T11019
Symbol
tgfbrap1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
140726757 (tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140726757 (tgfbrap1)
Membrane trafficking [BR:
haka04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140726757 (tgfbrap1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
Motif
Other DBs
NCBI-GeneID:
140726757
NCBI-ProteinID:
XP_072899637
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Position
4:complement(147745177..147787106)
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AA seq
863 aa
AA seq
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MSIKAFELVPVLERDLLIGDRTWMTIDCIECCGKNLYVGTNDCFIYHFLLEEKVSSSGRL
VFTPIKQLHIYLGLKKAVNELKAASALNRLLVLCDNTVTLLHMINLEPIPSGAKIKGVIA
FAVNENPVTGDPFCVEVCTISLKRKTVQIYAVHEDRVQLMKEVSTPEQPVAIAVDGYFLC
LAMSTQYIILCYNTGVSQDLFPFNSEEKQPIVKRIGREEFLLAGPGALGMFVTAAGISQR
APVHWSENVIGAAVCFPYVVALDEEFLTVHSMLDQQQKQTIPFRDGHILQDFEGKLILAT
SKEIHILAPLPLERQIQDLLASHRVEEALVLAKAARRNIPKDKFQVMYRRFLQQAGFIQF
GQLQFLEAKELFRNGQLDVRELMSLYPLLLPSTSTFIRSHPPLHEYADLNQLMQGDQEKI
KKCKRFLMSYLNEIRSTEVANGYKAEIDTALLKLYAEDNHDSLLDLLVSENSCLLVDSVS
WLEKYEKYFALGLLYHYNGQNEAALQLWVKIVDGELQDTTRSDLFEYIVDFLSFCSNHEL
VWKYADWALQRIEEVGVRIFTRRPVDENQTTSMNPDDIVNYLHKYKKAIVVYLEHLVFER
KIQKEKYHTHLAILYLDKVLELHSQGENVSEELSSARCTLKNLLQHSNLYRVHLLLGKIR
ETDLYMERAILHGKLEEHEKALKILVHKLKDFQAAEDYCLWNSNGEDPLRRQRLFHMLLT
LYLHPDDTSDELVMAGVDLLNKHAVHFDAVRVLQLIPEEWSLQLLSPFLTKAMRRSFHSK
CTAELSSNLAKSENLIFKHTKVKSRGNSIKLSDKKICQVCCSSFTEPMFVRYPDGSLVHI
RCATKPHSSPATDQNFARHKNQS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaaggcatttgaacttgttcctgtgcttgagcgagatctactgataggcgat
agaacgtggatgactattgactgcattgaatgttgtgggaagaatctttatgtaggaaca
aatgactgttttatctatcacttcctattggaagaaaaagtatcctcctcaggaagactt
gtgtttactccaataaaacaactgcacatttatctggggcttaaaaaagctgtgaatgag
ctgaaagcggcatcggctttgaacagactattggttctatgtgacaatactgtgacttta
ttacatatgatcaatctggaaccaatcccatcaggagctaaaatcaaaggagtaattgca
tttgctgtaaatgagaatccggtgactggagaccctttctgtgttgaagtttgtaccatt
tcactaaaacggaaaactgtgcaaatatatgcagtgcatgaagatcgtgtccagttaatg
aaggaggtatccacaccagaacaaccagttgctatagctgtagatggctacttcctttgc
ttggcgatgagcacacaatatattattttgtgctacaacactggtgtttcacaggacctg
ttcccattcaatagtgaggaaaaacaaccgattgtaaaacggattgggcgagaggaattt
ttattagcaggaccaggtgcattgggaatgtttgtgacagcagcaggaatctcccagcgt
gcacctgttcactggtcggagaatgtgattggagcagctgtgtgctttccttatgtggtg
gctctggatgaagagtttcttactgtacatagtatgcttgaccaacagcaaaagcagaca
attccattccgagacggtcacatactacaagactttgaagggaaactgattttggccact
agtaaagaaatacatattctggcacctttgcctttggaaaggcagatccaagatcttctt
gccagccacagagtggaggaagctcttgtcctagcaaaagcagcgcgacggaatattcca
aaagacaaatttcaggttatgtacagaagatttctgcagcaagctgggtttatacagttt
ggccagcttcaatttttagaagctaaagaactcttcaggaatggccagctcgatgtaaga
gagttaatgtctctctatccactactgcttccttcaacctctacatttatacggtcccat
ccccctttacatgaatatgctgacttgaatcaactcatgcagggtgaccaagagaaaatt
aagaagtgcaagcgtttccttatgagctacttgaatgagattcgaagcactgaagtagca
aatggctacaaggcagaaattgacacagccttgctgaagttgtatgctgaagataaccat
gacagtttgctggatttgttggtttctgaaaattcctgtctattagtggactctgtttct
tggctggaaaaatacgagaaatactttgcacttggtcttctttatcactataatggacaa
aatgaagcagcactacagttgtgggtgaagatcgttgatggagagctccaggatacaacc
cgttctgatctttttgaatatattgttgattttctaagcttctgctctaatcacgaactg
gtatggaagtatgctgactgggccttacaaagaattgaagaggttggtgtccggattttc
acaaggcgaccagttgatgaaaaccagacaacctctatgaatccagatgacattgtcaac
tatcttcacaagtataagaaagctattgttgtgtatttggaacacttagtatttgaaaga
aagattcagaaggagaaataccacacacatttggctatattatacctggataaagtacta
gaattgcactcccagggagaaaatgtttcagaagaactatcttcagcacgttgtactctg
aaaaacttactacagcactcaaatctttatagagttcatcttttgctaggtaaaattagg
gagacagatctctacatggaacgtgcaatattacatggaaaactggaagaacatgaaaaa
gctctcaagatcctggttcacaagttaaaagatttccaagctgctgaggactattgtttg
tggaattccaatggcgaggatcctttacggaggcagaggctcttccacatgttattaacc
ctttatttgcacccagatgacaccagtgatgagctggtaatggctggtgtggaccttctg
aataaacatgctgttcattttgatgcagttcgagttctgcagctgatcccagaagagtgg
tcattgcaactgctttcaccattcttaaccaaagcaatgagaagaagctttcattctaag
tgcacagcagaactttcatccaacttagcgaagtctgaaaacttaatttttaaacacaca
aaggtaaaatcaagaggaaacagtattaaactttcagataaaaaaatttgccaagtatgt
tgcagctctttcacagaaccaatgtttgtgcgatacccagatgggagtcttgttcatatc
cgctgtgctacaaagccccatagttcgcctgccactgaccagaactttgcccgtcataaa
aatcaatcctga
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