Hemitrygon akajei (red stingray): 140726941
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Entry
140726941 CDS
T11019
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140726941 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140726941 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haka04147
]
140726941 (vps36)
Membrane trafficking [BR:
haka04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
140726941 (vps36)
Exosome [BR:
haka04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140726941 (vps36)
Exosomal proteins of colorectal cancer cells
140726941 (vps36)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
DUF1351
DUF5847
Motif
Other DBs
NCBI-GeneID:
140726941
NCBI-ProteinID:
XP_072900075
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Position
4:complement(170894848..170956617)
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AA seq
386 aa
AA seq
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MDRFVWTSGLLEINETLVIQQRGVRLYDGDEKTQFDLGTLLLSTHRLLWRDHKRTDCCIT
LPLSQIVFFEEQAAGIGKSAKIIVHLHPVPPNKEPGPYQSSKYTFIKLSFREHGQIEFYR
RLTEELSQKRWEHISVSQPMQSASKPQAGRVRAVGIVGIERKLEERRKETDKNITEAFED
LDKLMKKAKEMVDLSKSIANKIKEKQGDISEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLAGMLQAPLEEQGGMMALTEVYCLTNRARGMELLSPEDLVNACKMFEALKLP
MRLRVFDSGVMVVQLQSHNEDEMITSALDTVSQKGSLSSEEYAKLVGISVLLAKERLLLA
EKFGHLCRDDSVECLRFYPNLFLTQD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccggtttgtgtggactagtggcctgctggagattaacgagaccctggtgatccag
cagcgcggagtccgtttatacgatggcgacgaaaagacacaatttgacttgggaaccctt
cttcttagcacacacagattactttggagagaccacaaaagaactgattgttgcatcacg
ttgcccctgtcacagattgttttctttgaagaacaagccgctggaataggaaaaagtgct
aagataatagtccatcttcacccagttccacccaacaaagagcctggtccatatcagagc
agcaagtacactttcatcaaactatccttcagggaacacggacagattgagttttataga
cgactaacagaagaattatctcagaagcgatgggagcatatttctgtatcacagccaatg
cagtcagctagtaaaccacaagcaggaagagtgagagctgtaggaattgtgggtattgaa
aggaagctggaagagagacgaaaggagaccgacaaaaacatcactgaagcttttgaagat
ctcgataagttaatgaaaaaggccaaggagatggttgacttgtcaaagtcaatagcaaac
aaaatcaaagagaagcagggagatatttctgaggatgagacgatccgtttcaaatcctat
ctgttgagcatgggaatagctaatccagttaccagagaaacgcatggatctggaacacat
tatcacatgcaactggcgaaacagctggcaggaatgttgcaagctccattagaggaacaa
ggtggaatgatggcactgacagaggtctactgtttaacaaaccgtgctcgaggaatggag
cttctctcaccagaagatttagtgaatgcttgcaaaatgtttgaggcactgaagttacca
atgagattgcgtgtttttgatagtggagtaatggtggttcaactacagtctcataatgaa
gatgaaatgatcacatcagctctggacactgtgtcacagaaagggtcccttagttctgaa
gagtatgctaaacttgtgggcatttcagtgctactggccaaagaaaggctactgcttgca
gagaagtttggacacctttgtcgcgatgattctgttgaatgcctgcgattttatccaaat
ttgtttttgacacaagactga
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