Hemitrygon akajei (red stingray): 140727003
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Entry
140727003 CDS
T11019
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04810
Regulation of actin cytoskeleton
haka05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
140727003 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140727003 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140727003 (cyfip1)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140727003 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
140727003 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
CsiV
Motif
Other DBs
NCBI-GeneID:
140727003
NCBI-ProteinID:
XP_072900234
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All DBs
Position
4:complement(180999315..181155284)
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AA seq
1259 aa
AA seq
DB search
MSDEGTMTAQVTLEDALSNVDLLEDLPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVT
GIARYIEQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEV
LEPEVTKLMNFMYFQRNAIDRFCNEVKRLCHAERRRDFVSEAYLLTLGKFINMFAVLDEL
KNMKCSVKNDHSAYKRAAQFLRKMSDPQSIQESQNLSMFLANHNKITQSLQQQLEVIPGY
EELLADIVNICIDYYENRMYLTPGEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRIHLSK
VDKFFKQLQVVPLFGDMQIELARYIKTSAHFDENKSRWTITSSSSSPQYNIVEQMIQIRE
DHMRFISELARYSNSEVVTGSGRQEAQKTDAEYQKLSELALQGMQLLSQWSAHVMEVYSW
KLVHPTDKYSNKECPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNH
AIRHTIYAALQNFAQKTLREPLRQAIKKKKNVIQSVLQAIRKTICDWEVGQEPTNDPALR
GEKDPRGGYDIKVTPRAVGPSSTQLYMVRTMLESLIADKSGAKKTLRSSLEGPTIMAIEE
FHRHSFFYTHLLNFSETLQQCCDLSQLWFREFFLELTMGKRIQFPIEMSMPWILTDHILE
TKEASMMEYVLYSLDLYNDSAHYALTKFRKQFLYDEIEAEVNLCFDQFVYKLADQIFAYY
KIMAGSLLLDKRLRAECKNQGTNIPTPPSNRYETLLKQKHVQLLGRSIDLNRLITQRISA
AMHKSLELAITRFESEDLTSIVELEGLLEVNRMSHKLLGKYLTLDSFDAMFREANHNVSA
PYGRITLHVFWELNYDFLPNYCYNGSTQRFVRTVLPFSQEFQRDKQPNAHPQYLYGTKAL
NLAYNTIYSNYKNFVGPPHFRAICKLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLME
VMPKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSL
SLEEVCDLLHAAPFQNILPRIYIKEGERLDTKMKRLEAKYAPLHLVPLIERLGTPQQVAI
AREGDLLTKERLCCGLSMFEVILTRIQQFLDDSIWRGPLPSNGVMHVDECVEFHRLWSAM
QFVYCIPVGAHEFTVEQCFGDGLHWAGCMIITLLGQQRRFDVLDFCYHLLKVQKHDGKDD
VLKNVPLKKMVDRIRKFQILNDEIFAILSKYLKSGDGENVPVEHVRCFQPPIHQSLASS
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgaaggtaccatgactgcacaagtgaccttggaagatgccttatccaatgtt
gaccttttggaagacctgccactgccagaccagcagccttgcatcgaaccaccaccttca
tcgctattataccagccaaatttcaacaccaactttgaagacagaaatgcatttgttacg
ggtattgccagatatattgaacaagcaacagttcattccagcatgaatgaaatgttggag
gaaggtcaagaatatgctgttatgttgtatacttggagaagctgttcaagagccattcct
caggttaaatgtaatgaacagcctaacagagttgaaatttacgaaaagacagtggaagtc
cttgaaccagaagtcacaaagctaatgaacttcatgtatttccagcgcaatgcaattgac
cgcttttgtaacgaggtgaaacgactttgtcatgctgagaggaggagagactttgtttca
gaagcttaccttctcacactgggcaaattcattaacatgtttgcagtcttggatgaactg
aaaaacatgaaatgtagtgtgaaaaatgaccattcagcatacaaacgagctgcccagttt
cttcgtaaaatgtcagacccacaatctatacaagaatctcaaaacctgtccatgtttctt
gcaaatcacaacaaaattactcagtctctccagcagcaacttgaagtcattccaggctat
gaggagcttcttgctgacattgtaaatatttgtattgattactatgagaacagaatgtac
cttactcctggtgaaaagcacatgctgctgaaggtgatgggctttggtctgtaccttatg
gatggaagtgtaagcaacatatacaaattggatgccaagaaacgaatacacttgagcaaa
gttgataaatttttcaagcaactgcaggttgtaccattatttggtgacatgcagatagag
ttggccaggtatatcaagacaagtgctcattttgacgaaaacaaatcaaggtggaccata
acatcatctagcagcagtccgcaatataacattgttgaacaaatgattcagatcagagaa
gatcacatgcgtttcatttctgagcttgcccgctatagcaacagtgaggtggtgacaggg
tcaggcagacaagaagctcaaaagactgatgcagaataccagaagttatctgaactggct
ttacagggaatgcagctgctgtcccagtggagtgctcatgttatggaagtgtactcttgg
aagcttgtgcatcctacagacaagtactccaataaagaatgtccagacaatgcagaggaa
tatgaaagagcaacaagatacaattacacgagtgaagagaaatttgcacttgttgaggtt
atagcaatgataaaagggctacaagtgttgatgggtagaatggagagtgtgttcaatcat
gcaattcgacacaccatttatgctgcactccaaaactttgctcagaaaactcttcgtgaa
cctttgcgtcaggccatcaaaaagaagaaaaatgtgatccagagtgttcttcaagctatt
cggaagactatatgtgattgggaggttggacaagaaccaacaaatgatcctgcgctcaga
ggagaaaaggatcctcgaggtggctatgacatcaaggttaccccccgagcagttggacca
tccagcacccagctctacatggttagaactatgctagagtccctcattgccgacaaaagt
ggtgcaaagaaaacattaagaagtagtcttgagggccccaccattatggcgatagaagag
tttcatcggcattcattcttctacactcacttgctcaatttcagtgaaacacttcagcag
tgctgtgacctgtctcagctttggttcagagagttctttcttgaattgacaatgggaaaa
agaattcagtttcctattgagatgtcaatgccctggatcttgactgaccatattttggag
accaaagaagcatccatgatggagtatgtgctatattcattggatctgtacaacgacagt
gcccattatgctcttactaaattcagaaagcagttcctttatgatgaaattgaagcagag
gtgaatctctgctttgaccaatttgtgtacaagttggctgaccagatatttgcttactac
aagattatggccggaagcctccttttagacaagcggctgcgggctgaatgcaagaaccaa
ggaactaatataccaacgcccccatcaaatagatatgagactttattgaaacagaaacat
gtacagcttcttggtagatcaatagacttgaatcgactgatcactcaaagaatttcagca
gcaatgcacaaatcattggagctggcaattacacgttttgagagtgaagacctcacctcc
attgtggagcttgaaggtcttttggaagtcaatcgcatgagccacaagctacttggtaaa
tacctaaccctggacagttttgatgctatgttcagggaagccaatcacaatgtatcagcg
ccatatggaagaataacccttcatgttttctgggagctcaattacgatttccttccaaac
tactgttacaacggttccacgcaaaggtttgtgcgtactgttctgcccttctctcaggag
tttcagagagataagcaaccaaatgcacatccacagtacttgtatggaaccaaggcattg
aacttggcgtacaataccatttacagcaactacaaaaattttgtgggtcctcctcatttt
agagcaatttgcaagctcctgggctaccaaggaattgccgtggtaatggaagaactgctg
aaagttgttaagagcctgctacaaggaaccattttgcagtatgtaaagactttaatggaa
gtgatgcctaaaatctgccgtttacccagacatgaatatggctccccaggaattctggaa
ttcttccaccaccagctaaaagatattgtggaatatgcagaactgaagactgtatgcttc
caaaatttacgagaagttggaaatgcggtcctcttttgtcttctaatcgagcagagtctg
tctttagaagaagtctgtgacctgctacatgcagcacctttccagaacattttgccgaga
atctacatcaaagaaggtgagaggttagacacaaagatgaaaagattggaagccaagtat
gctccacttcaccttgtcccattgatagagcgacttggaacgcctcagcaagttgcaatt
gcaagggaaggagatctgctgacaaaggagcgtctctgttgtggactgtccatgtttgaa
gtgattttgacgagaatccagcaattcctggatgattccatttggcgaggaccccttcca
agtaatggcgtaatgcacgtggatgaatgtgtggaattccacagactctggagtgccatg
cagtttgtatactgtattccagttggggcacacgaattcactgtagagcagtgctttgga
gatgggctgcactgggctggctgtatgattattacattgcttggacagcaacggcgcttt
gacgtcctcgacttctgttaccatttgctcaaagtccagaagcatgatggcaaagatgat
gtcctcaagaatgtgcctttgaagaaaatggttgacagaattcgcaaattccaaattctg
aatgatgaaatatttgctatcttgagcaagtatctgaagtcaggtgatggtgaaaatgtc
cctgtggagcatgtccgctgtttccagccacctattcatcagtcgctagcgagctcctaa
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