Hemitrygon akajei (red stingray): 140727086
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Entry
140727086 CDS
T11019
Name
(RefSeq) autophagy-related protein 16-like
KO
K17890
autophagy-related protein 16-1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04136
Autophagy - other
haka04140
Autophagy - animal
haka04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140727086
04136 Autophagy - other
140727086
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
140727086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140727086
03029 Mitochondrial biogenesis [BR:
haka03029
]
140727086
Membrane trafficking [BR:
haka04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
140727086
Others
Specific organelles associated proteins
Auto phagosome
140727086
Mitochondrial biogenesis [BR:
haka03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
140727086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
ATG16
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_DCAF12
DUF7675
Motif
Other DBs
NCBI-GeneID:
140727086
NCBI-ProteinID:
XP_072900431
LinkDB
All DBs
Position
4:complement(194992498..195100082)
Genome browser
AA seq
590 aa
AA seq
DB search
MAAGDPGRWRANISRQLQERDRDQKHRFKTIINSYNQLLEKSDFLQHWWGMRDPYFPSVP
SHVQEPETTDSHQQRYQEEISKLQRINGELAQEVFERNKDCKQKEMELQATQSRLEVLLE
KLAEMKEERRELLGRVALLEQANQTVKGEYDALRLQHQAQWQQLSQRELEASKLIHDLLI
LKSREAQHLNSSIEKPRRAEQRHLQKDLEIASSIPISKKPETPRREPVVPQEEPELHEGT
SLKTRWTSRSASFSFLDQSRFLQTVKGIFRKRSSTSCSEFDCIPAGIFCMSRIPACVRHS
VFAHDGEVNTVKFSPSSKFLATGGSDRIVKLWDIVGGTLQNRRTLEGSNDGVTSIDFDPL
GVQLLAGSYDNSARLWSLRDYELKHTLSGHSAKVTAARFRFTFREVVTGSHDRTIKIWDL
NKEACVKSLSVPSRCSDVVCSDYSIISGHFDKNVRLWDSRSGVQTDAIVLQGKVTSLDIN
QDRTQLLGCSRDDLLSVVDLRMNRVTKELRSEGFKCGADWTKAIFSPDGCYAVAGSSDGT
LHVWDIHTGDVKAALSGEHRSSINAVSWSQSGEYLVSVDRAKVANLWTDY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggagatcccggtcgctggcgagcgaacatctcccggcagctccaggagagg
gaccgcgaccaaaagcaccgcttcaagaccatcatcaactcctacaaccaactcctggag
aaatcagacttccttcaacattggtggggcatgcgtgatccctactttccctctgttccc
agtcatgtacaggagcctgaaaccacagattcacaccagcaacgttaccaagaagagatc
tcgaaactgcagcgtatcaatggcgagcttgcccaggaggtgtttgaacgaaacaaggat
tgcaaacagaaggagatggagctgcaggcgacgcagagcaggctggaggtgctgctggag
aagctggcggagatgaaggaggaacggagggagctgttgggccgagtggcgttgctggag
caggcgaaccagacggtgaagggggaatacgatgccctgcggctgcagcaccaggcacag
tggcaacagttgagccagcgcgagctcgaggcctccaagctgatccacgacctgctgatc
ctcaagtcccgtgaggctcagcacctcaacagcagcatcgagaagcccaggagggctgag
cagagacatctacagaaggatctggaaattgcttcaagtatcccaatctccaagaaaccg
gagacacctcgccgggaaccagttgtccctcaggaggaaccagagctacacgaaggcaca
agtctcaagacccgctggacttccaggtcagcatctttcagctttctagaccagtccagg
ttcctccagactgtcaaagggatcttccggaaacgctccagtacctcctgcagtgaattt
gactgcatccctgctggcatcttctgcatgtccaggatccccgcctgtgtccggcatagt
gtgtttgcacacgacggagaggttaacactgtcaaattctccccaagttccaagttccta
gccacaggcggaagtgacaggattgtgaaattgtgggacattgtcggaggcaccctacag
aacaggaggaccctggaggggagcaatgatggggtgaccagcatcgactttgacccattg
ggtgtgcagctgcttgccggatcatacgacaattcagcgcgcctgtggagcctgagggac
tatgagctcaagcacacgctgtcaggtcacagtgcaaaggtcacagctgcaaggttcagg
ttcactttccgggaggtggtgacggggagccacgataggacgatcaaaatctgggacctc
aataaagaagcctgtgtgaaatcactgtctgtcccatctcggtgtagcgatgttgtgtgt
tccgattacagcatcatcagcgggcactttgacaagaacgtgcgcctgtgggacagcagg
tcaggagtccagactgacgccatcgtactgcaggggaaggtgacatccttggacatcaac
caggaccggacgcagctgctcggttgctctcgggatgacctcctgagtgtggtcgatttg
cggatgaacagggtcacgaaggagctgaggtcagaagggttcaaatgtggagctgattgg
accaaagcaatcttcagccccgatgggtgctatgctgtggctggatcctcagatgggacg
ctccatgtctgggacatccacactggggacgtgaaggcagccctgtctggagaacacagg
tcctccattaatgccgtctcctggtcacagtcaggcgagtacctggtcagtgtggacaga
gcgaaggtggccaatctctggactgactactga
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