Hemitrygon akajei (red stingray): 140727089
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Entry
140727089 CDS
T11019
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140727089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140727089
Membrane trafficking [BR:
haka04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
140727089
Endosome - Golgi transport
Arf GTPase associated proteins
140727089
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
140727089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
RA
SAM_2
SAM_1
PH_11
PH_6
PH_8
PH_3
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
140727089
NCBI-ProteinID:
XP_072900437
LinkDB
All DBs
Position
4:complement(195734899..196022364)
Genome browser
AA seq
1478 aa
AA seq
DB search
MTLEEGALSVQDWLGALHLDQYADMFTQHAYHHLADCWGLSGEDLSRLGVHLPGHRKRIL
SALRKGPPSRNPLAAEATLVDAREKPVPRKRNVYPYQAHPPAEKTSLPPVPPRQGLGCPP
KKIQPVPRPRIRPPLVGDGLRKDPPVLPPHQDTESRGRPPPLPARPLPRLQDRETSVDCG
TTPKVDLDELKARHRSPPLLIPRAKLSLQHQSAGSRPPRRHFDLLKQYSAPSLITECEQR
SPDDNFDLPAEMNSNDNAGQSPFSERDSAEESPSNFFSDEDNADDYEMMINLPHLCSSSD
NLGLATLQEDEAADEEESSPSKRPAEVPISSTPPSSRTMDTSQLCPLIKAGWLDKNPPQG
SYIYQRRFVRLDTDYLRYFENEKEVYSKRVISVRSITRVSYVGEQKFEVVTSNRTFVFRA
ESDGERNEWVRVIQQTVEEKKERLESRATCTSDYFLRESISEFGEKYGYLELRASRNKVY
VSIRGDKVWLYKNEEDHRLGIGITSVEMNVATVKETDRRGFDLTTPYRTFSFVADSDSEK
DDWVEALRESTAEALSNYEVAEQIWGMEPNTVCVDCGIPKPEWASINLCLVMCKKCAGEH
RALGPGISKVRSLKMDKKVWTEQLIQLFQHIGNRKANCFWAANVPPSEAISESSSNVERK
QFISAKYREGKYRRYHLLFGNQEELDKALCAAVVTSDLEETMSLVFCGADTGCFTGDPAY
PTPIDLARQAKQELQVEFLMQNRHSETPRLELGNIDKQYYVAPQSITHNGFLYKTASVGK
PITERKSKEEFSKRWCVLDNSVLSYYESDRNSTPNGAIDMRDVVCLSVNSPAAHGFEHTF
EVFTDPERLFMFGTESAESIKEWVKSIAKSFLPPAVDLMDHDFERIGRLLYKDGLSLERA
KVGWFALEKSTLFVWSEDSDKVEAINLRKLQELSEQADHGVLVLVEKRRTLYIQSERKLD
FLGWAAAIQKAAGSTGNTLSEQQLTDEDIPVLVDRCVAYITQYGLTSEGIYRKSGQKSKT
TNLLELFLKNARGVRLREGEHQVDDVSNTLKRFFRESIRESIFTDNVYQDWLHTSMIPDE
WMKVQQYQKLAANLPKVNRATLKALINHLYCVQKVSEKNQMTTHNLAIVFGPTLFQTDGQ
DNKVGRVVEDLINHFIVLFNVDEHQLKRQLDEIVSIIRLRDAPLMQSGQNAGDFICTVYL
EEKKEDCELSLKVPATMTAQELTNEVLYLRKLSTKEKDNWCCFEVIDREEMERPLHYTEK
VLPILHSLGADSYMVVKKNPSLETMLMYLGSKVADQKHGMAKFREERKLGLGTGSFNDRY
FMLTDGILRLFKEVRSNKPDKEWPVKSLRVYLGVKKKLKPPTCWGFTIIYENKERHERQQ
WYLCCDTQMEQREWLATFLYVQHNGIIWPSNSLSPWSARQPSESRLGNVSLIPLRGSANE
MRNSVAAFAADPLSGPQDSGSGVAEQKERGSLLRSERE
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgacgttggaggagggggctttgagcgtccaggactggctgggggccctgcacctcgat
cagtatgcggacatgttcacccagcacgcctaccaccacctcgccgactgctgggggctc
agcggggaggacctctcccgcctcggcgtccacttgcccgggcatcgcaaacgcatcctc
tccgccttgaggaaggggccgccatcacggaatcccctagccgctgaggccacgttggtt
gacgccagggagaagcctgtcccgagaaagaggaacgtctacccctaccaggcccaccca
ccggccgagaagacctcccttccccccgtcccgcccaggcagggactggggtgccctccc
aagaaaatacagcccgtcccccgtcctcgaatacgacccccactggtgggggatggcctg
aggaaagatccacctgtgctccctccgcaccaggacacagagagcagggggcgaccccca
ccactgccggcgaggcctctgcccaggctccaggatcgggagaccagcgtggactgcggc
accacacctaaagtggacttggacgaacttaaggccagacaccggagccctcctttgctc
atacctcgggccaagctttccctacagcatcagagtgccggcagccgtcctccgaggcgt
cacttcgacctgctgaagcaatattccgctccgtcgctgattacggaatgcgagcagagg
tccccggatgacaacttcgacctccctgctgagatgaacagtaatgacaatgctggccag
agcccgttctcggagagagacagcgctgaggagagcccgagtaacttcttcagtgacgag
gacaatgcagatgactacgaaatgatgatcaatttgcctcacctgtgctccagttctgac
aaccttggactggccacgctgcaggaagatgaggcagcggacgaggaggagagcagtccc
tccaagaggccggctgaagtcccgatctcctcgacccctccctccagccgcaccatggac
acgagtcagctctgccctctcatcaaagccgggtggctggacaagaatccgccgcagggc
tcctacatctaccaacgccgctttgtccgactggacaccgactacctgaggtacttcgag
aacgagaaggaggtttattccaaacgggtgatctctgtcagatccatcactcgggtgtcc
tacgtcggtgagcagaagtttgaggttgtcacgtccaaccgtacctttgtgttccgggcg
gagagcgatggagagcggaatgagtgggtacgagtgatccaacaaacagtggaggagaag
aaggagcgtctggagtcgagagcaacctgtacatccgactacttcttgcgggagagcatc
tctgaatttggggagaagtacggatatctggaactgcgggcatcccggaataaggtctac
gtctcaatccggggggacaaggtgtggctctacaagaacgaagaggatcaccggcttggg
attggcatcacctctgtggaaatgaacgtggccacagtgaaagagacagacaggcgggga
ttcgatctcacgacaccatacagaaccttcagttttgtggctgattcggactctgagaag
gatgattgggtcgaagcgttacgggaatccaccgctgaggccctgtccaactatgaggtt
gcggagcagatttggggcatggagcccaacaccgtgtgtgtggactgtgggatccccaag
ccagagtgggcctccatcaacctgtgtctggtcatgtgcaagaaatgtgcaggcgaacac
agagctcttggaccaggcatctccaaagtccgcagcctgaagatggacaagaaggtgtgg
acggagcagctgattcagctgttccagcacattggaaaccggaaggctaactgtttctgg
gcggccaacgtcccgccgagcgaggccatcagcgagagcagcagcaacgtggaacgcaag
cagttcatcagcgccaagtaccgggaggggaagtaccgtcgctaccacctgctcttcgga
aaccaggaggaactggacaaggctctgtgtgcagccgtggtcaccagcgacctggaggag
acgatgtcgctggtgttctgcggggccgacaccggctgcttcacgggtgaccctgcgtac
ccgacccccatcgatctcgctcggcaggccaagcaggagctacaggtggagttcctcatg
cagaaccggcactccgagaccccccgcttggaactaggcaacatagacaagcaatactac
gtggccccccagtccatcacccacaacggattcctctacaagactgcctcggtgggaaag
ccgattacagagaggaagtccaaagaagaattcagcaaacggtggtgcgttctggacaac
agtgtgctcagttactacgaaagcgaccggaactccacgcccaacggagccatcgacatg
cgtgatgtggtctgtctgtctgttaacagccctgctgcccatgggtttgagcacacgttt
gaggttttcacggacccagagcgtctgttcatgtttgggactgagagtgcagagtccatt
aaagagtgggtcaagtccattgccaagtccttcctccctccggccgtggacctgatggac
catgactttgagcggattggacgtctgctctacaaggacgggttgagcctggagcgggcc
aaggtgggctggtttgcgctggagaagtccacgctctttgtctggtccgaggactcggac
aaggtggaggccatcaaccttcgcaagctgcaggagttgtcggagcaggctgaccacggg
gtgctggtattggtggagaagaggcggactctgtacatccaatccgaaaggaagctggac
ttcctgggatgggcagcggccatccagaaggcagcgggcagcaccgggaacacattgtct
gagcagcagttgacagacgaggacatccctgttctggtggatcgctgtgtggcatacatc
actcagtacggtttaacttctgaaggcatctacaggaagagcgggcagaaatcgaagacc
accaacctgctggagctattcctgaagaatgctcgtggcgtgcggttgagggaaggagag
catcaagttgacgatgtgtccaacactttgaaacggttcttcagggagagtatcagggag
agcatcttcactgacaacgtgtaccaagactggctccatacatcaatgattcccgatgag
tggatgaaggttcagcagtaccagaagctcgccgctaacctgcccaaggtcaaccgcgcc
accctcaaagctctgatcaaccacctctactgtgtacagaaggtctccgaaaagaaccag
atgaccacgcacaatctggccattgttttcgggcccacactcttccagacagatgggcag
gacaacaaggtgggccgagtggtcgaggatctcatcaatcacttcatcgtgctcttcaac
gtggacgaacatcagctgaagcgacagctggatgagatcgttagtatcatccgtctccgg
gacgccccgctgatgcagtctggccagaatgctggggacttcatctgcaccgtctacctg
gaggagaagaaggaggattgtgagttgagtctaaaggtcccggccaccatgacggcgcag
gagttgaccaatgaagttttgtatcttcgcaagttgagcaccaaagagaaggacaactgg
tgttgctttgaggtgatcgaccgggaggaaatggagcggcccctccattacaccgagaag
gtgttgcccattctgcactctctgggggctgacagctacatggtggtgaagaagaacccg
tcactggagaccatgctgatgtacctggggagtaaggttgccgatcagaagcacggaatg
gccaagttccgagaggagcgcaagttgggacttgggacggggagtttcaatgaccgctac
ttcatgctgacggacggcatcctccggctcttcaaggaagtgcggagtaacaagccagac
aaggaatggccggtgaagagtctgagggtctacctgggtgtgaagaagaaactcaaaccg
ccgacgtgctggggattcaccatcatttatgaaaacaaggagaggcacgaaaggcagcag
tggtatctatgctgtgacacacagatggaacaacgggagtggctagctaccttcctgtat
gtgcagcacaacggcattatctggccctcgaactcgctgagtccctggagcgcccgccag
ccctcggaatcccggcttggaaacgtctccctgatcccgctacggggcagcgccaacgag
atgaggaatagcgtggcagcttttgctgctgacccactgtctgggccccaggactctgga
tccggagtggctgaacagaaagaaagaggcagcctgctgcggagtgagcgtgaataa
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integrated database retrieval system
