Hemitrygon akajei (red stingray): 140727126
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Entry
140727126 CDS
T11019
Symbol
trpc2b
Name
(RefSeq) transient receptor potential cation channel subfamily C member 2b
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
haka04040
]
140727126 (trpc2b)
Ion channels [BR:
haka04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140727126 (trpc2b)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_3
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
140727126
NCBI-ProteinID:
XP_072900523
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Position
4:199809007..199911639
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AA seq
876 aa
AA seq
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MEHLTEDNWREIAGKKMKFPPSLIGAIYDGNLAKIYKLLQTSDGILRQLDDAEDRSWREA
LNLAIRMSNEEIIVALLRCVKFDFRQIHEALLVAVDMNLINVVKLLLERLDQQKGVSHNK
VDIMSFSLALFDHSIDSSRFAPGVTPLTLACQKNLFEIVDLLMKKGHVIPTPHKISCACP
ECLNARQYDMLKFSLSRMNTYKGLASRPYLAIANEDAMLSAFKLSRELKQLSKKEPEFKP
EYLNLEELCQDLAVELLGMCRNQSEVNAILNDCGEDQVEDDMDNQAFEEGIPNLGRLRLA
VNYNQKRFVAHPICQQVLTSIWCGKLTWWRGSRTIWLIFISSSLFLSMPVLCLIYLIAPR
TKLGQVVRTPVIKFLLHSSSYIWFLVLLLVESILAQQSRELSSSRKEPIYINSFHMIWVV
GYFWYECKEVWIEGLRSYLLDWWNFLDIVILSMYLASFALRIVIYLSGELYCQDDPSSFY
CHYFTITERHQWMQEDPQMVAEVLFAITSMLSLARLTSILPAHETLGTLQISIGRMIDDM
MRFMFLLMIILTAFLCGINNIYVHYVDLDRLGNFNGTLQFLFWTMFGMEEPTSVDVSEYV
VAEFVGRVLYGIFTIIMVIVLLNMLVAMITNSFQKIEDDADVEWKFARSKLYLCYFREGL
TLPVPFNIIPTPKSFIYLLRWIFRKMCCISSKKNDYPPLPSTFVNSGAGGTQAEGREAYR
LQVIKTLVQRYIETSRQEFAEKQRKDLGNRITELSKFVGRLQSEIKRLRYGMGAAGSGTK
SGDASTVISKYILGARNRFQEAEDGSEPGSRKASFKVTVHQNSDDGAEPPGACQPVAEEG
DEEDDEGCPPYPSGEGKEDPSAGQKHGDAEQAEEKD
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggagcatctgacggaggacaactggcgggagatagcgggcaagaaaatgaagttcccg
cccagcctgatcggagccatctacgatgggaacctggccaagatctacaagctgctgcag
acgagcgatgggatcctcaggcagctggacgacgccgaggaccggtcctggagggaggcc
ctcaacctggccatccgcatgagcaacgaggagatcatcgtggccctgctccgctgcgtc
aagttcgacttccgtcagatccacgaggccctgctggtggcggtggacatgaacctgatt
aacgtggtgaagttgctgctggagcgcctggaccagcagaagggggtgagccacaacaag
gtggacatcatgtccttctcgctggccctcttcgaccactccatcgacagctcccgcttc
gcaccgggggtcacccctctcaccctcgcctgccagaagaacctcttcgagatcgtggac
ctcctgatgaagaagggtcacgtcatccccactccccacaagatctcgtgcgcctgcccc
gagtgcctcaacgcgcggcagtacgacatgctcaagttctcgctgtctcgcatgaacacc
tacaagggtctggccagccggccctacctggccatcgccaatgaggacgccatgctgagt
gcctttaaactcagcagagagctcaaacagctgtccaagaaggagcccgagttcaagccg
gagtacctgaacctggaggaactgtgccaggatctggccgtcgagcttctcggcatgtgc
cggaaccagagtgaggtcaacgccatcctcaatgactgcggagaggaccaggtcgaggat
gacatggacaaccaggccttcgaggagggaatccccaacctgggccggctccggctggct
gtcaactacaaccagaagaggtttgtggcccacccgatctgccagcaggtcctgacgtcc
atctggtgcggcaaactgacctggtggaggggcagccgcaccatctggctcatcttcatc
tccagcagcctcttcctcagcatgcccgtgctctgcctcatctacctgatcgcacccagg
accaagctggggcaggttgtccgcacaccggtcatcaaattcctcctgcactcctcgtcg
tacatctggttcttggtccttttgcttgtggagtccatccttgcccagcagtcccgggaa
ctgtcctcgtccaggaaagagcccatctacatcaactccttccacatgatctgggtggtg
ggatacttctggtacgagtgtaaggaggtgtggattgaggggctgcgtagttatttgctg
gactggtggaatttcctggacattgtcatcctgagtatgtacctggcgtctttcgctctg
cgcatcgtcatctacctgagcggcgagctgtactgccaggacgacccctcttccttctac
tgccattacttcaccatcactgaaagacaccaatggatgcaggaagacccacaaatggtg
gccgaggttctgttcgccatcaccagtatgctgagcctggctcgtcttacctccatcctg
cccgctcacgagaccctcggaaccctgcagatatccatcggaaggatgatcgatgacatg
atgaggttcatgttcctgttgatgatcatcctcaccgcgttcctgtgcgggatcaacaac
atctacgtccactacgtcgacctcgatcgcctgggcaacttcaatggcaccttacagttc
ctcttctggaccatgttcggcatggaggagcccacctccgtggatgtctccgagtacgtg
gtagcggagttcgtgggtcgcgtcctctacggcattttcaccatcatcatggttatagtg
ctactaaatatgttagtcgctatgatcactaactccttccagaagatcgaggatgacgca
gatgttgagtggaaatttgctcggtcaaagttgtacctttgctattttcgtgaaggtctg
actctccctgtccccttcaacatcattcccacgcccaaatcgtttatctacttgctcagg
tggatctttcgcaagatgtgctgcatcagcagcaagaagaacgactaccccccactgccg
agcacattcgtgaactcgggtgcgggtgggacccaggcagagggtcgcgaggcctatcgt
ttacaggtgatcaaaaccctggtgcagaggtacatcgagacgtcccggcaagagtttgcg
gagaagcagaggaaagacctcgggaaccggattacggagctgagcaagtttgtgggccgg
ctgcagtcagagattaagcgactgcgctacggcatgggggcagcagggagtggtaccaag
tctggtgatgcctccaccgtcatcagcaagtacatcctgggtgctcgcaaccgcttccag
gaggccgaggacggctcggagcccggctctcgcaaagcctccttcaaggtgaccgtgcac
cagaactcagatgatggggccgagccccctggtgcgtgtcagccggtggcagaggagggc
gatgaggaggacgatgagggctgccccccgtaccccagcggggagggcaaagaggatccc
tccgccggacagaagcacggagacgctgaacaggcggaagagaaggactga
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