Hemitrygon akajei (red stingray): 140727231
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Entry
140727231 CDS
T11019
Name
(RefSeq) interferon alpha-21-like
KO
K05414
interferon alpha
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04060
Cytokine-cytokine receptor interaction
haka04217
Necroptosis
haka04620
Toll-like receptor signaling pathway
haka04621
NOD-like receptor signaling pathway
haka04622
RIG-I-like receptor signaling pathway
haka04623
Cytosolic DNA-sensing pathway
haka05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
140727231
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
140727231
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140727231
04621 NOD-like receptor signaling pathway
140727231
04622 RIG-I-like receptor signaling pathway
140727231
04623 Cytosolic DNA-sensing pathway
140727231
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140727231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
haka04052
]
140727231
Cytokines and neuropeptides [BR:
haka04052
]
Cytokines
Interferons
140727231
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Gene cluster
GFIT
Motif
Pfam:
Interferon
Phage_tail_APC
Motif
Other DBs
NCBI-GeneID:
140727231
NCBI-ProteinID:
XP_072900599
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Position
5:117773504..117779797
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AA seq
186 aa
AA seq
DB search
MALGRVWRVCSVWLLLTVTLTLGCERLQLLRVLNTETLGELKEMGGHLPRQCVTERLSLK
TKPLELVKLSAEVHAQDRIWIVHQTLHHLRRIYSMNLSSVSWVQSSVELLQLLLDRQLRV
LDVCVRKPGSESRPRKNAAILKYFQKLREFLKQKGFSNCAWETTRTETMTHLKQLLLIMA
KISRDH
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggccgtgtttggagagtttgcagtgtgtggctgttgttgaccgtgaccctg
accctgggctgtgagaggttacagttactgcgagttctcaacacagagactctgggcgaa
ctgaaagaaatgggtggccacctccctcgacagtgtgtgactgagaggctgtcgttgaaa
accaagcccttggagctggtgaaactttcggcggaggttcatgcccaggaccggatctgg
attgtccatcagaccctgcatcacctccgcaggatctacagtatgaacctgagctcagtc
agctgggtccagagctcagtggaactcctccagcttctcttggatcggcagctcagagtg
ctggatgtctgtgtccggaaaccaggctcagagtccaggccaaggaagaatgccgcaatt
cttaaatactttcagaaattgagagagtttctgaaacagaagggattcagcaactgtgcc
tgggagacaacccgcactgagaccatgacgcatttgaaacagctccttctcattatggca
aaaatcagcagagatcactga
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