Hemitrygon akajei (red stingray): 140727244
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Entry
140727244 CDS
T11019
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein-like
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
haka03037
]
140727244
04990 Domain-containing proteins not elsewhere classified [BR:
haka04990
]
140727244
Cilium and associated proteins [BR:
haka03037
]
Other cilia and associated proteins
Stereociliary proteins
140727244
Domain-containing proteins not elsewhere classified [BR:
haka04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
140727244
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Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
140727244
NCBI-ProteinID:
XP_072900609
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Position
5:138877917..138965183
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AA seq
538 aa
AA seq
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MSAYLMICAVLYLGVDINLAGGHGPCTDLQPLDLLSEVAEAPRMEIYGIRMVQEHGVRGL
RFSKDTKAVSFSASLIFKVCHYFPAEFSIVITLKLNSITLKKNEYILTLIEEDLNNMLLG
LRISPDKLHLEFAQGGLPNSHRERVTFHDIYLADHQWHTLVLAVSANFVSLTVDCCPPID
TYLDIPFPEYLGTARSRFYIGNRRRQKGLFSGLLRQLVMLPGSDATQRICPSPTPRLAAL
SIPKILMELPLRPSDNDILKYPYETEVKVMVGNHPPCTETEVSHLWFDVFNKGFFICNGK
NWISILKSKTNYVKGDNHNINSIIYKWNPESRLFERNQTIPTSGAYDWEFFTVGPYSFLV
VANTFNGTSTRIYSRIYIQLGGVFRLFQSIPTYGATDWEMFRVEGRVFLAVANSQSYQTG
SANGVNSFNINSTIYELNITAQMFVKFQDILTYSAVDWEFFTVGDDSFLVVANSYDGSKF
FLNSVIYRWQGYENFVPVHHLPTYGCTDWEQFNTEEGSYLIYSSAKERISKVLRLKIY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttacctgatgatctgcgcggtcctgtacttgggagtggacatcaatctggcc
ggagggcacggtccgtgcacagatttacaaccactggatctcctatcagaagttgctgaa
gcccctcgaatggagatatatggaatcaggatggtccaggaacatggcgtccgtgggctg
cgattcagtaaggataccaaggcagtcagcttctctgcctctctcatcttcaaagtctgt
cattacttcccagcagaattctccattgtcatcacactgaaactgaacagcataacatta
aagaagaacgaatacattttgacgctgattgaagaggatttaaacaacatgttgctgggg
ctgaggatctcgcctgacaagcttcacctggagtttgcccagggaggcctgcccaacagc
cacagggagcgcgtgacgttccatgacatctacctggccgaccaccagtggcacaccttg
gtgctggctgtgtcagccaacttcgtgtctctcactgtggactgctgccctcctattgac
acgtatctggacatacctttcccagaatatttaggcacggcaagatctcgattttacatt
gggaacaggaggagacagaaaggactgttttcagggttactgagacaactggtgatgctg
ccgggatctgatgcgacccagaggatctgccccagtcccactcccagactggcggcgctc
tccatcccgaagatcctgatggagctccctctgcggccttcggacaatgacatcttgaag
tacccttatgaaacagaagtgaaggtgatggtaggaaaccatcctccatgcactgagact
gaagtcagccacctctggtttgatgtcttcaacaaaggcttctttatctgtaatggcaag
aactggatatcgatcttaaaaagtaagaccaattatgtcaaaggagacaatcacaacatc
aacagtattatctacaaatggaaccctgaatcacgattgtttgaaagaaaccagactatt
cccacatccggagcctatgactgggaattcttcaccgtcggaccatattccttcctcgtc
gtggcaaacactttcaatggaacctcaacccggatctactctcggatttacatccaactg
ggtggagtgttccgacttttccaatcaatcccgacatacggtgctacggactgggagatg
ttccgtgttgaaggaagagtctttcttgctgtcgccaacagtcagagctatcagaccggc
tcagcgaacggagtcaactccttcaacatcaactccaccatctatgaactgaacatcacc
gcacagatgtttgtcaaatttcaggacatcctgacctacagtgctgttgactgggagttc
ttcacggtgggtgatgacagcttcctggttgtggcaaactcgtatgacggctccaagttc
tttttaaacagtgttatatacaggtggcagggctacgaaaactttgtcccggtccatcac
ttgccgacgtatggctgtacagactgggagcagttcaacacggaggaaggctcgtacctc
atctactccagtgccaaggaacgcatttccaaggtgctcagactgaaaatctattga
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