Hemitrygon akajei (red stingray): 140727341
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Entry
140727341 CDS
T11019
Name
(RefSeq) tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04145
Phagosome
haka04210
Apoptosis
haka04530
Tight junction
haka04540
Gap junction
haka04814
Motor proteins
haka05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140727341
09143 Cell growth and death
04210 Apoptosis
140727341
09144 Cellular community - eukaryotes
04530 Tight junction
140727341
04540 Gap junction
140727341
09142 Cell motility
04814 Motor proteins
140727341
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140727341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140727341
03036 Chromosome and associated proteins [BR:
haka03036
]
140727341
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
haka04812
]
140727341
04147 Exosome [BR:
haka04147
]
140727341
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140727341
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
140727341
Cytoskeleton proteins [BR:
haka04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
140727341
Exosome [BR:
haka04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140727341
Exosomal proteins of other body fluids (saliva and urine)
140727341
Exosomal proteins of colorectal cancer cells
140727341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
140727341
NCBI-ProteinID:
XP_072900713
LinkDB
All DBs
Position
5:113674480..113699933
Genome browser
AA seq
447 aa
AA seq
DB search
MHECISIHIGQAGVQIGNACWELYCLEHGIQPNGFMARDWTYGAADNSYNTFFTDTGGGK
LVPRALFIDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYSIGREIIDLALD
RIRKLADECTGLQGFLVFHSFGGGTGSGFTSLLMQCLSVDYGKKTKFEFTIYPAPQISTA
VVEPYNSILTTHTTLEHSDCCFIADNEALYDICRRNLDIERPTYTNLNRLLAQVVSCITC
SLRFEGAQNVDLVEFQTNLVPYPRIHFPLVAYAPVVSAEKAFHEQLSVAQLTNACFEPAN
QMVKCDPRHGKYMSCCLLYRGDVVPKDVNASIASIKTKRSIRFVDWCPTGFKVGINYQPP
TVVPGGDLAKVLRAVCMLSNTTAIAEAWARLNYKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGKDSSELDADEY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagtgtatctccatccatattggccaggctggtgtccagatcggaaatgcttgt
tgggaattgtactgtttagaacatgggatccagcccaatggatttatggccagggattgg
acttatggagctgcagacaattcctacaacactttctttactgacacaggtggcgggaag
cttgtaccaagagctctattcattgatttagaacccactgtcattgatgaggtccgtact
ggtacctatcgacagctcttccatcctgagcaactcatcactggcaaggaagatgctgcc
aacaattatgctcgtgggcactacagcattggcagagagataattgatctagctctggat
agaatacgcaaactggctgacgaatgcacgggacttcagggttttctggtgttccacagc
tttggtggaggaactggctctgggttcacttctctattgatgcagtgcctttctgttgac
tatggcaagaagacgaagtttgaatttactatttacccagctccccagatatcaacagct
gtggtcgagccctacaactccatcctcaccacccataccaccctagaacactcagactgt
tgcttcatagcagacaatgaagctttgtatgatatctgccgcaggaacctggacattgag
cgtccgacctacaccaacttgaaccggctgctcgctcaggtcgtctcctgtattacatgc
tcccttcgctttgagggtgcacagaatgttgatctggtagagttccagaccaacttggtt
ccatatcctcgcatccatttcccattggttgcttatgcaccagttgtctcagctgaaaag
gctttccatgagcagttgtctgtggctcagctcaccaatgcctgctttgagccagcaaac
cagatggttaaatgtgatcctcgtcatgggaagtacatgtcttgctgtctcttatatcga
ggtgatgtggtgccgaaagacgttaatgcatctattgctagcatcaagaccaaacgctcc
attagatttgttgactggtgccccactggcttcaaagttggcatcaactaccagcctccc
actgtggtccctggtggggatctggccaaggtgcttcgtgcagtctgtatgctgagcaac
accaccgccattgcagaagcctgggctcgtctcaattacaagtttgacctgatgtatgcc
aagcgtgcctttgtgcattggtatgtgggggaggggatggaggagggggagttctctgag
gctcgggaggatttagcggctttggagaaagattatgaagaagtaggcaaggacagttcc
gaacttgatgctgatgagtattag
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