Hemitrygon akajei (red stingray): 140727443
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Entry
140727443 CDS
T11019
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140727443 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haka03041
]
140727443 (u2af1)
Spliceosome [BR:
haka03041
]
Complex A
U2 snRNP components
U2 related factors
140727443 (u2af1)
Complex B
140727443 (u2af1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
140727443
NCBI-ProteinID:
XP_072900839
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Position
5:complement(981296..1071631)
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AA seq
262 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNLYRNPQNCTQ
TADGFHCAVGDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHE
EDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKSQQHGSRVTSSGDKRLLTITPKHLMAAIRHRSRSRSRERKRSRSRERGG
RGGRDRDRDRRRSKDRERSGRF
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctggcgtcgatattcggtaccgagaaggacaaggtcaactgttcattt
tattttaaaattggagcctgtcgtcatggagacagatgttctcgtttgcacaacaagccc
acattcagtcagaccattgcgctcttgaacttataccgtaaccctcaaaactgtacccag
acagcagacggtttccactgtgctgttggtgatgttgaaatgcaggaacattatgatgag
ttctttgaggaggtcttcacagaaatggaggaaaagtatggtgaaattgaagagatgaat
gtgtgtgacaatctgggtgatcacctggttggaaatgtctatgtaaagtttcgccatgaa
gaagatgcagaaaaggcagtgaatgatctaaacaaccgctggtttaatggacagcctatc
catgcagagctctcacccgtgactgatttcagagaagcctgttgcagacagtatgaaatg
ggggaatgcacccgggggggcttctgtaacttcatgcacctgaaaccgatttcacgggag
ttacgccgtgagctttatggacgccgtcgcaagagccagcagcacggtagccgtgtgacc
tcgtctggggacaaacggctgctaaccatcaccccaaagcacttaatggctgccatcaga
cacagatcaagatcaagatctcgtgagcgcaagcgctccaggtcacgtgagcgtggaggc
cgcggtggccgggatcgagaccgtgatcgtaggcgttccaaggatcgtgaacgatctggg
aggttctga
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