Hemitrygon akajei (red stingray): 140727510
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Entry
140727510 CDS
T11019
Symbol
chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140727510 (chaf1b)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
140727510 (chaf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
CAF-1_p60_C
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
Beta-prop_SPT8
eIF2A
Beta-prop_EML
Ge1_WD40
RMC1_N
Beta-prop_HPS5
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
140727510
NCBI-ProteinID:
XP_072901001
LinkDB
All DBs
Position
5:18304696..18368050
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AA seq
576 aa
AA seq
DB search
MKFVTCEIAWHNKEPVYSVDFQHGLHGRIDRLASAGVDTAVRIWKVEKDGDGKAVIDFLS
NLIRHTKAVNVVRFSPNGEILASGGDDALILLWKLNNNKDIKEPEQNLIEEDIQLNKENW
TVHKTLRGHIEDVYDICWTTDGNHMVSGSVDNTAIMWDIIKGIKLSIFNEHKSYVQGVTW
DPLGQYIATLSCDRVMRVYSTQTKKVAFNVSKMSAGCDGETKSYRIFHDDGMKSFFRRLT
FTPDGSLLLTPAGCVEAGENVTNTTYVFSRKNLKRPIAHLPCPAKATLAVRCCPIFFELK
QAKTEDESTKKMNMFNLPYRLVFAVVSEDSVLLYDTQQSVPFGYISNIHYHTLSDITWSR
DGTYLTISSTDGYCSFIAFEEGELGVPLKEKPVLFVPTPGTADKKAKKGQANRSIPTTPK
QSECSTPSRVMEQNDSGAPSRLKAPSVAAKISPTTSLSSKTSPTSLDKKSPQSAPQGSKA
SQSRRITLNTLEAWSRPSKPLVPRRISLTPANPSSSQQTAAPAVTQAEHERPSPPSDPSC
KSPDAKRSRTEDDPTTVDSLKMDDDCGKNSAQSDSK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtcacctgtgaaattgcgtggcataacaaagaacccgtatacagtgttgac
ttccagcacggactgcatggcagaatcgatcgactggcctctgcaggggttgacactgcc
gtccggatatggaaggttgagaaagacggagatggcaaagcagtcatagattttttgtcc
aatctaatacgtcacacaaaggcagtgaacgttgtgcgcttctcccctaacggtgaaatt
cttgcatcgggaggtgacgatgcgctaatcctcctgtggaaactgaacaacaacaaagac
atcaaagaaccagaacaaaacctaattgaagaggacattcagttaaataaagagaactgg
acagtgcataaaacattaagagggcacatagaagacgtgtacgatatctgctggacaact
gatggaaatcacatggtgtctggatctgttgacaatacagccattatgtgggacattatt
aaagggataaaactgtcaatctttaatgaacacaagagctacgtgcaaggtgttacatgg
gatcctttggggcagtacattgctacacttagctgtgaccgggtaatgcgtgtgtacagc
acacagaccaaaaaagtagcctttaacgtaagcaagatgtcagctggttgtgatggagag
accaagagctatcgaatattccatgatgacggtatgaagtcattcttccgccgactcacc
ttcacaccagatggctccctgcttctcactccagctggctgcgttgaagcaggagaaaac
gttaccaacacaacttatgtcttttccaggaaaaatttgaaacggcccattgctcacctg
ccttgtccagctaaggctactctagctgttcgatgttgcccgatattctttgagctaaag
caggctaaaactgaagatgagtcgaccaagaaaatgaacatgtttaacctgccgtatcga
ctggtgtttgctgttgtttctgaggattctgtactgttatatgacacacagcagtcagta
ccgtttggctatatttcaaacatccattatcacaccctgagcgatataacatggtcgaga
gatgggacctacctgaccatatcgtccacggatggctactgctccttcatcgcgtttgag
gaaggcgaattgggcgtgcctctgaaagagaagccggtgctgtttgtgccgaccccaggc
acggcagataagaaagcaaagaaggggcaagcgaacaggagtatccccacaaccccgaaa
cagtccgagtgcagcacacccagcagggtcatggagcagaacgactcgggagccccgtct
cggctgaaggcacccagtgtggcagcgaagatctctcccacgacctctctcagctccaaa
acttccccgacttccctggacaagaaatctcctcagtctgcccctcagggcagcaaggcc
tctcagtccagaaggatcactctgaatacgttggaggcctggagcaggcccagcaagccc
ttggtgcccaggcgaatctctctcacccctgcgaaccccagctcgtctcagcagacagcg
gcaccagcagtaacccaagcagaacatgagagaccttctccgccaagtgacccttcctgc
aagtctccagacgcgaaacgctccagaacagaggacgatcccaccactgtggatagcttg
aaaatggacgatgactgtggaaagaacagtgcacagtcagacagcaagtga
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