Hemitrygon akajei (red stingray): 140727559
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Entry
140727559 CDS
T11019
Name
(RefSeq) runt-related transcription factor 1-like isoform X1
KO
K08367
runt-related transcription factor 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
140727559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140727559
Transcription factors [BR:
haka03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
140727559
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
140727559
NCBI-ProteinID:
XP_072901141
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All DBs
Position
5:complement(24620524..24840342)
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AA seq
474 aa
AA seq
DB search
MASNSIFESFPSYQQCFMRDTNTSRRFTPPSTTLSTAKMSDSLPLAPPDSALGKLRPADR
SMVDVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVLAGN
DENYSAELRNATAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKIT
VDGPREPRRHRQKLEEQSKSAGLAFSERLSELEQLRRSAMRLSPHHPTTAPNPRPSLNPT
AAFNPQAQAQIQDTRHVQPSPPWSYDQSYPYLGQITTPSVHPATPISPGRASGMPTITAE
ISSRLSGASDLTAFGDPRMGIDRQFSALPSLSDSRFADPRMHYPGAFAYTPTPVTSGIGI
GMSAMTTAARYTYLPPPYPGSAQGQAGPFQTSSSPYHLYYGTSTGSYQFSMMAGGERSPP
RILPACTNASTGSSLLNPNLPSQSDVVDADGSHSNSPTNISTAGRLEEAVWRPY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaacagcatatttgagtcatttccttcatatcaacaatgcttcatgagagat
accaacaccagccgtcggttcacgccgccttcgacaacgctgagcacggcgaagatgagt
gactccctgccgctggcgccgccggacagcgctctgggtaaactgcggccggcggatcgc
agcatggtcgacgtgttagctgatcatcccggagagctggtccggaccgacagtccaaat
ttcctctgctccgtcctgccgactcactggaggtgtaacaagacccttcctatcgcattt
aaggtggtcgccctgggagatgttcctgacgggactctggtcacggtcctggccggcaac
gacgagaactactcggctgagctgcgtaacgccacggccgtcatgaagaatcaagtcgcc
cgctttaacgacctgcggttcgtcggccggagtggacgagggaagagttttacgttgacc
atcacggtgtttacgaaccctcctcaagtcgccacttaccacagggccatcaagattacc
gtggacggccccagagagcccaggagacatagacagaagctggaagagcagagtaagagt
gcgggcctggccttctcagaacggctcagtgaattagagcagctacgtcgctcggccatg
aggctcagccctcatcaccccactaccgctcccaacccacggccctcactgaaccccaca
gccgcctttaaccctcaggcacaggcccaaattcaagataccaggcacgtccagccctct
ccgccgtggagctacgatcagtcctacccttacctcgggcagataacaacaccctccgtt
catcctgcaactcccatatcccccggccgagcaagcggcatgccaacaatcacagccgaa
atttccagccggctttcaggagcctccgatctcaccgcatttggggacccaagaatggga
atcgaccgccaattctcggctctcccctctctctcggatagccgcttcgcggacccccgg
atgcactacccgggagctttcgcgtacacgcccacgccagtgaccagcggcatcggaatc
ggcatgtcagctatgacaactgcagcgcgctacacctacctgcctcccccttaccccggt
tctgcccaggggcaggcgggaccattccaaactagctcctctccataccatctgtactac
ggcacctctactggctcctaccagttctccatgatggccggcggagagcggtcgccgccc
cgcatcctccccgcctgcactaatgcgtccacgggatcgagcctcctcaacccaaaccta
cccagccagagcgacgtggtggacgcagatggaagccacagcaactccccgacaaacatc
agcaccgctgggagactggaagaagccgtgtggagaccatattaa
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