Hemitrygon akajei (red stingray): 140727613
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Entry
140727613 CDS
T11019
Symbol
abcf2a
Name
(RefSeq) ATP-binding cassette sub-family F member 2a
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haka03009
]
140727613 (abcf2a)
Ribosome biogenesis [BR:
haka03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
140727613 (abcf2a)
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
AAA_28
AAA_22
MMR_HSR1
RsgA_GTPase
AAA_24
AAA_18
AAA_23
NACHT
AAA
VapE-like_dom
AAA_14
Motif
Other DBs
NCBI-GeneID:
140727613
NCBI-ProteinID:
XP_072901288
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All DBs
Position
1:70392127..70452502
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AA seq
628 aa
AA seq
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MPSDLAKKKAAKKKEAAKARQRKPKAAEGTEENGDLGTDEMENSKTQINGSSGHDAGLAH
IINELDEFELKKAAARAVTGVLASHPNSTDVHIINLSLTFHGQELLSDTKLELNTGRRYG
LIGLNGTGKSMLLSALGHRELPIPEPIDIYHLTREMPPSDNTPLDCVVEVDKERITLEKE
AERLAHEDSECEKLLQIYERLEELDADKAEMRASRILHGLGFSPAMQRKKMKDFSGGWRM
RVALARALFIKPFMLLLDEPTNHLDLDACVWLEEELKSFSRILVLISHSQDFLNGVCNNI
IHMHNRKLKYYTGNYDQYVKTRLELEENQMKRFNWEQDQITHMKNYIARFGHGSAKLARQ
AQSKEKTLQKMMASGLTEKVISDKTLSFYFPSCGKIPPPVIMVQNVSFKYTNDGPLIYKN
LEFGIDLDTRVALVGPNGAGKSTLLKLLAGDLLPCDGMIRKHSHVKIGRYHQHLQDQLDL
DLSPLDYMMKCYPEIKEKEEMRKIIGRYGLSGKQQVSPIRNLSDGQKCRVCFAWLAWQSP
HMLFLDEPTNHLDIETIDALADAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQTIRKWQ
GGILSYKEHLKSKMLGDNPQSSRKTPCA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgatttggccaagaaaaaggcagccaaaaagaaggaagcagcaaaggctcgt
cagcgtaagcctaaagccgcagaaggtactgaggaaaatggtgatcttggcacagatgaa
atggaaaattccaaaacacagattaatgggtcttctggtcacgatgcaggcttggctcat
attatcaatgagctggatgagtttgagctgaagaaagcagcagcccgggcagtcacagga
gtcttggcctctcatcccaatagtacagatgttcatattattaatctgtcactcacattt
catggtcaagagctactaagtgacaccaagctggagctgaatactggccgtcgctatgga
ttgattggtctcaatggcactggcaaatccatgctgctgtctgctctaggtcatcgggag
ttaccgataccagaacccatcgacatttaccaccttacacgagaaatgccacctagtgac
aatacaccactggattgtgtggtcgaggttgacaaggaacgcatcactttggagaaagag
gcagagcgtctggcccatgaagactctgaatgtgagaaacttctacaaatctatgaacgt
ttggaagagttggatgcggataaggcagaaatgcgagcttcacggattctacatggtctt
gggttttcaccagccatgcaacggaaaaagatgaaggatttcagtggcggttggagaatg
agagtagctcttgccagagctttgttcatcaaacccttcatgctactgttggatgagccc
actaatcatctcgatctggatgcctgtgtgtggctcgaggaagaactgaaatcgttctca
aggattcttgtgctgatatctcattcccaggattttttgaatggagtttgcaacaatatt
attcatatgcataatcggaagctcaagtactatacaggcaactatgaccagtatgtaaag
accagattagaactggaagagaaccagatgaaacgatttaattgggagcaagatcaaatc
actcatatgaagaactacattgcacgttttgggcatggcagtgctaaattggcaaggcaa
gcacagagcaaagagaaaaccctgcagaagatgatggcttctgggctgactgagaaagta
atcagtgataagactttatcattctatttcccgtcatgtgggaagattcctcctccggtt
attatggtgcagaatgtgagcttcaagtacacaaatgatgggcctttgatctacaagaat
ctagaatttggtattgatttggataccagggtggccttggttgggccaaatggagctggg
aagtcaacattactcaaactgctagccggtgatctcttgccttgcgatggaatgattcga
aagcactcgcacgtcaagattgggagataccatcagcatttgcaagatcagttggacttg
gacctctcccctttggattacatgatgaagtgctatccagaaatcaaagaaaaggaggag
atgcggaaaatcattggacgctatgggctctcagggaagcagcaggtgagtcccatccga
aacctgtcggatggacagaagtgtcgagtgtgctttgcctggctggcttggcagtctcct
cacatgctgtttcttgatgagcccacaaatcacctggatattgagactattgatgccctt
gctgatgctatcaatgagtttgagggcggtatgatgctggtcagccacgacttcaggctc
attcaacaggtagcacaggagatctgggtgtgtgagaagcagacaatcaggaagtggcaa
ggcggtatcctgtcctacaaggagcatctgaaatcaaagatgttgggtgacaatcctcaa
agcagcaggaagactccctgtgcctga
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