Hemitrygon akajei (red stingray): 140727681
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Entry
140727681 CDS
T11019
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140727681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haka03000
]
140727681
03021 Transcription machinery [BR:
haka03021
]
140727681
Transcription factors [BR:
haka03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
140727681
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
140727681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Ntox15
Homeobox_KN
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
140727681
NCBI-ProteinID:
XP_072901428
LinkDB
All DBs
Position
5:41494534..41663325
Genome browser
AA seq
781 aa
AA seq
DB search
MADGASKDEKPESKMSNPSESIKPSVDGNEGSTGAQTNGLDFQRQSIPTGGPITTAQALL
GQLQQVNYMSDVMNRYFYVQLPGTTLQPTPSQTLNLQVKSEESGDSSSQQTTTQPSLQPS
LQTTLPQTQLMLAGGQITGLTLTTAQQQLLIQQAQAQLLAAAVQHSANQQHNATGATISA
TTATPMAQIPITQPIQIQDLQQLQQLQQQNLNLQQFVLVQPGHPITTNLQPTQFIISQTP
QGQQGLVQAQNLLQQLPQQSQANLLQSQPSITFSTQPATPTRTTISTAPIQSVQQSQSTP
KRVDTPNIEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEA
LNLSFKNMCKLKPLLEKWLNDAENLSVDSTLSNPSSLASPGLGIEGLSRRRKKRTSIETN
VRVALEKSFLENQKPTSEEIMMIADQLQMEKEVIRVWFCNRRQKEKRINPPSSNSGTTTT
TKTNFNNPTSMVSTSNLVTSSTPTTRAVNAMQMPVSSAGVTSFSISGTTASVTASTNVAS
VITGLSSAVSTSTVTSPALTPSPSASISVTESSSSSDTSTTQTTSTGLVNPLCTSQIMVS
ASGLQTAGTALQAGAAQVPTGAGLATNPSLAAMAAAAGLTNPGLMSAPQFAAGGALLSLN
PGSLGGALGPALMSNSTLATIQALASSGTLPITSLDASGNLLFANAANAGATPNIVTAPL
ILNPQNLSLLTSNPAVSLISAAGTTGHAPSLQMASMSADSSQNSSFTVTSAGGATNTTKA
Q
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggagcgtccaaagatgaaaagcccgaatctaaaatgagcaatccgtcagaa
tctatcaagccttccgtggatggcaatgaagggagcacaggtgcgcaaacaaatggactg
gacttccaacggcagtccattccaacaggagggccaattacaacagctcaggccttacta
ggacaactacagcaggttaactacatgtcagatgtgatgaacagatacttttatgtgcaa
cttcctggaacaactttgcaaccaactccttcacaaacattaaatttacaggtaaaaagt
gaggaatcgggggattcttcgtcccagcagacaacaactcagccttcactgcagccatct
ttacagaccaccctaccacagacacagcttatgcttgctggagggcagatcactgggtta
acattgacaacagcacagcagcagttgttaatccagcaagcacaggcccagctactggct
gctgcagtccaacactcagcaaatcagcagcataatgccacaggagcaactatctctgcc
acaacagcaactcctatggcacaaatacccatcactcaaccaatccaaatacaagatctg
caacaattacagcagttacagcaacagaacttgaatctgcagcagtttgttctggtgcaa
ccgggtcacccaatcaccaccaacttgcaaccaacgcagttcatcatctcacaaactcca
cagggacagcaaggtctcgtacaagcccagaaccttctacaacaactacctcagcaaagc
caagccaacctcctgcagtctcagccaagcatcaccttcagcacgcagccagcaacacca
acacgcacaactatatcaacggctcctatccaatcggtacagcagagccagtcgacacca
aagcgcgtagatactcctaacatagaggaaccaagtgaccttgaggaacttgagcagttt
gccaagacatttaagcagagacgtatcaaacttgggttcactcagggcgatgtaggactt
gccatgggaaaactctatggaaatgatttcagccaaactacaatctctcgttttgaagcc
ttgaacctcagctttaagaacatgtgcaagctcaaaccattgcttgaaaagtggttgaat
gatgcagaaaatttgtcagtggactctacactgtcaaaccccagttccctggcttctcca
ggtctgggaatcgaagggctgagccgcaggagaaagaaacgcaccagcatagagaccaat
gttcgagtggccttagaaaagagtttcctggagaaccaaaagcctacctcggaggagatc
atgatgattgctgatcagctgcagatggaaaaggaagtgatcagagtctggttctgtaac
agacgccagaaggagaaacggataaatcctcccagcagtaacagtggcactaccactacc
accaaaacaaactttaacaaccccacctccatggttagcactagtaaccttgtgacaagt
agtacaccaactactcgggctgtaaatgcaatgcagatgcctgtgtccagtgccggtgta
acaagcttcagcatttcaggtacaactgcatcagtgacagcttcaacaaatgtggcatct
gtaatcactggcttatcttctgcagtttccacatcaacagttacttctccagctctaacc
ccttcaccatcagcgtctatttcagttactgagtcgtccagcagcagtgatacaagtacc
acacagacaacctcaactggcttagtaaatcctttgtgcacaagccaaatcatggtgtca
gcttctggactgcagacagctggcactgcgctacaagcaggagctgcacaggtacccact
ggtgctgggcttgctaccaatccaagcctagcagccatggctgctgctgcaggactaact
aatcctggcctcatgtcagcccctcagtttgcagctggaggtgccttactcagtctgaat
ccagggagtcttggtggtgctcttggtccagcattgatgagtaatagcacactggcaact
attcaagcgcttgcatccagtgggacacttcctataacatcccttgatgccagtggaaat
ctattgtttgcaaatgcagcgaatgcaggggctactccaaacatcgttacagcccctctt
attttgaacccacaaaacctatccttactcaccagcaacccagccgtaagcctgatatct
gctgccgggacaactggacatgcacccagtcttcagatggcttcaatgtcagctgattcc
agccagaactcttcattcactgtgacctcggcaggcggggctaccaataccaccaaggct
caatga
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