Hemitrygon akajei (red stingray): 140727852
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Entry
140727852 CDS
T11019
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
140727852 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
haka01002
]
140727852 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140727852 (usp16)
Enzymes [BR:
haka01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140727852 (usp16)
Peptidases and inhibitors [BR:
haka01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
140727852 (usp16)
Ubiquitin system [BR:
haka04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140727852 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
140727852
NCBI-ProteinID:
XP_072901803
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All DBs
Position
5:complement(70465714..70528027)
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AA seq
853 aa
AA seq
DB search
MRGSQTSAEVCRPPHRPVCRWSRPGTPKGPVPQCTHFHKGLNQRKVKKVFDQDWCDACDV
CKAEDKTKSKCEETDETPTIWLCLKCGHKGCGRNSEGQHALKHYKGPHSDTHSVALCLDN
WSTWCYLCDNAVHYEPMDQLGQLVSLVKKMVAGKSTKEATFPLSHENDNDKGRQDNETDA
EKESSWEEKNQQISVKGLSNLGNTCFFNAVIQILSQTYVLNELIRGTKMNGNTLTIITPN
SSELEPLEIHTEQLGPLSSAMHQFLLDIQHTKKSVVTPKELFTQVCKKAVRFKGFQQQDS
QELLHYLLDGMRTEEIKRFSAAILKALNYPSEKREDEESRKIRKVYENEASMLNFVDQVF
GGTLTNTIMCEECKMVTLVKETFLDLSLPVLDDQGDKKKSQGKGGRNTTENDENENLGRC
NGNFISKDRNEISTGPSKYEQKKAKKQAKKQAKHHRQQQKSQAKTLSLEDSSVKCSLDEG
QRGKLDASAEGNEDLDSDGIEAEASPEPDKCDSLSTDHCLATTAEETMAVNGQEVSQENL
DVEKGSKSAETEQKERHSDSHNSKDSDTSDTLESNRISEDLVSGSSEDDETIINNMNKLN
LNEYVTNHDEITSNQVECESDSGTPNDRLSSIKTEQELFLDPEKAFCTSTNGKLLSGKDC
SVEACLQQFTQIENLTGANKLLCEKCTQRQYKSGMKSNANADDKCVYRNAKKQTLISSFP
PILILHLKRFHQLGFNLRKINKHIHFPQVLDLTPFCAVNCKNVEGYTNILYSLYGVVEHS
GTMRSGHYTAYVKVRAPRKHLSEYALTRCKVPIINAEAPRGRWFHVSDTSVKAVAESEVM
NAQAYLLFYERIF
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggtagtcaaacgagcgctgaagtgtgtcgtcccccccaccgtccggtgtgtcgt
tggagccggccaggaaccccgaaaggaccggtgcctcaatgtactcactttcataaggga
ttgaaccaacgcaaggttaagaaagtttttgaccaggattggtgcgacgcttgtgatgtc
tgcaaagctgaggacaaaaccaagagcaaatgtgaggaaactgatgaaacgccaaccatc
tggttatgcttaaaatgtgggcataagggttgtgggaggaattcagaaggacaacatgct
cttaaacattacaaggggccacattcagatacacattctgtggctctttgtttggacaac
tggagcacatggtgctatttgtgtgataatgcagtacattatgaacccatggaccagtta
ggacaacttgtaagccttgtcaaaaaaatggttgctggtaaatccactaaagaagctaca
ttccctctgtcacatgaaaatgataatgataagggaagacaagacaatgaaacagatgct
gagaaagaaagcagttgggaagagaagaaccagcaaatatcagtgaaaggacttagcaat
cttgggaatacatgttttttcaatgctgtcatacagatcttgtcgcagacctatgtgctg
aatgagctgattcgtggaacaaaaatgaatggaaatacattgacaattataactcctaat
tcttcagagctggaacctctagagatacacactgagcaactaggcccactgtcatctgca
atgcatcaatttcttcttgatattcaacacaccaaaaagagtgttgttactccaaaggag
ctgttcactcaagtctgtaaaaaggctgtgcgctttaaagggtttcaacagcaagatagc
caggagttacttcattatttgttagatggaatgagaaccgaggagatcaaacgatttagt
gctgccattttaaaagccttaaattatccttcagagaagagggaagatgaagaatccagg
aaaatcaggaaagtatatgaaaatgaggcttccatgctgaattttgttgatcaggttttt
ggtgggactttgacaaatacaatcatgtgtgaggaatgtaaaatggttacattagtgaaa
gaaacctttttagacttgtcactacctgttttggatgatcagggtgacaagaagaaatcc
cagggaaagggtggaagaaacactactgagaatgatgaaaatgaaaatcttggtcgttgt
aatggaaattttatctctaaggacagaaatgaaatttcaactggcccgagcaaatatgaa
caaaagaaggcaaagaaacaagctaaaaagcaagccaaacaccatcgccaacagcagaaa
tctcaagcgaaaacgcttagtttagaggattccagtgtcaaatgttctttggatgaaggt
cagagaggaaaacttgatgcctctgcagaaggcaatgaagacctagactcagatggcatt
gaagcagaggcctctccagaaccagataaatgtgacagcttatcaactgaccattgtctt
gcgaccacagcagaagaaacaatggcagttaatggtcaagaagtgagccaagaaaatcta
gatgttgaaaaaggcagcaaatctgccgaaactgaacaaaaagaaaggcactctgattcc
cataactccaaggactctgacacttcagatacattagagtcgaacagaatttcagaggac
ctagttagtggatccagtgaagatgatgaaactattatcaataatatgaataaactgaat
ctcaatgagtacgtgacaaatcatgatgaaataacttcaaatcaagtggagtgtgagagt
gattccggaactccaaatgatcgactctcttccattaaaactgaacaggagttgtttttg
gatccggagaaagcattttgcacatctacaaatgggaagctgctaagtggaaaagactgt
tctgttgaggcttgtttacagcagttcactcagatagaaaatctcaccggagcaaataaa
ctactttgtgaaaaatgtacccaaagacagtacaaaagtggaatgaagagcaatgcaaat
gcagatgacaagtgcgtgtacaggaatgccaagaaacaaacacttatttcgtcatttccc
ccaattcttatacttcatttgaaaaggttccatcagctgggattcaatcttcgtaaaata
aacaagcatatccatttcccacaagttcttgatcttactccattctgtgcagtgaactgc
aagaatgttgaaggctatacaaatatattatacagtctgtatggagttgtggaacacagt
ggcacaatgagatctggacattatacggcttatgtcaaagtgcgagctcccagaaaacac
ctttctgaatatgcactcactagatgtaaagtgccaatcatcaatgcagaggcacccagg
ggaaggtggttccatgtaagtgatacctctgtgaaagcagtggcagagtctgaagtaatg
aatgcacaagcctacctcctgttctatgagaggatcttttaa
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