Hemitrygon akajei (red stingray): 140727870
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Entry
140727870 CDS
T11019
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140727870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140727870
03036 Chromosome and associated proteins [BR:
haka03036
]
140727870
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140727870
Coactivators
SAGA/TFTC/STAGA complex
140727870
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
140727870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
140727870
NCBI-ProteinID:
XP_072901850
LinkDB
All DBs
Position
1:73715612..73841968
Genome browser
AA seq
732 aa
AA seq
DB search
MPAPDSPSPATQPPSSPAAPATFGQQSALVNGGAVGLAACSQGSMSSASDIPPITVVLRS
NPGAGPQPRSGLQFPAASTAIVATNPPPPVASATIPNMSASSLQLRPHRLAQTSLPLLQN
IQVPTGMVLVRSDSGQLVLVPQKAFAQAQAKARVQAQGNTTAAASNSTHTVRISNIQTNK
TQIVTNQVKASGVQQVNPLQTPVQTNTVPQRITLMQSQPVSGAITAKSITTVALKPSTPV
NSSAAVQVVQTTTSPETLENVKKCKNFLATLIKLASSGTQSVQMSNNVKTLVQKLLDGKL
EAEEFTNQLYQELKSSPQPYLVPFLKRSLPALRKLMPNSQAFIQQCLQKPETPATTLAAA
SGVSKPPHPEQATRTVKAASTAQQAKPLQARAQMVVQQSGAPAKIQESILPRTQAVTLQR
PLNHITVPVSQIQVKTVQGAPVTSVVKVPAVQGNGNSTVLVHASTDERFKREVTGTTFRV
ENNISDVASMAGVSFNEENTRILATNSELVGDVIRSCNEETFLSSVSLQKKTLEIGKKHG
VTEVNSDVLSTISRATQEHLRELVEKLTVTAQHRMMMYKDNDQYSLLSDTRSQLKFFEQL
DRLEKQRKDEDERETMLRLAKSRAKHEDPEQLRLKQRAKEMQQLELAQLAQREANLAALA
AIGPRKRKTPDSPSLGTGNEGFNSGGNALGVTRPRPFLRQKVTRVNLRDLLLCLEQDQAA
SHSLLLYRAYLK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcccgactctcccagcccggctacacagcctccgtcctcgcccgccgcccct
gcaaccttcgggcagcaatcagcgctcgtgaacggcggggccgtgggattagccgcctgc
tcacaaggcagcatgagcagcgcctccgacatccctcccatcaccgttgtcctacggtcg
aacccgggcgcgggtccacagccccgaagcggccttcagttccctgccgcttctactgca
attgtcgctaccaacccgccgcctcctgtcgcctccgccaccatcccgaatatgagtgcc
tcctctctacaactgagaccccaccggctcgcccagacgtcgctgcccctcttgcaaaat
atccaagtgccaacgggtatggtccttgttcggagtgatagtggacagctggtgctggtt
ccacagaaagcctttgctcaagcacaggccaaagctcgagtacaagcacagggcaacacc
acagctgctgcatctaacagtacacacactgtccgaatttctaatatacagacaaataaa
acccagatagttactaatcaagtgaaggcatcgggtgttcagcaggtgaatccgttgcaa
accccagttcagacaaatactgttccacagcgcatcactcttatgcagtcacagcctgtg
agtggggccattacagcaaaatccataacaactgttgctctgaagccatcaacaccggta
aattcgtcagctgctgtgcaagttgtacaaaccaccacttcaccggaaactttggaaaat
gtgaagaaatgcaagaacttccttgcaacattaattaaactggcttccagtggaacccag
tcagtgcagatgtccaacaatgtgaaaaccttggtgcagaagctactggatgggaagtta
gaagcagaggaattcacaaaccagctgtaccaagagctcaagtcttccccacagccttac
cttgtgccttttctcaagcgaagtttacctgccttacgcaagctgatgccaaattcacag
gccttcattcagcagtgcctacagaaacctgaaactccagcaacgacgcttgcagctgca
tctggagtatccaagcctccccacccagagcaggctacaagaacagtcaaggcagctagt
actgcacagcaggctaaacccctgcaggccagggcccagatggtagtccaacagtctgga
gcacctgccaaaatacaagaaagcatactgccaaggacacaagcagtgacattgcaaaga
cctctaaaccacatcactgtgcctgtatcgcaaatacaggtcaaaacagttcaaggagct
cctgtgacttcagtggtaaaagtcccagctgtacaaggaaatgggaattcaactgtcctt
gtacatgcctcaactgatgaaagattcaaacgggaggtcacagggacgaccttcagggtt
gagaacaacatcagtgatgtggcctctatggctggggtcagcttcaatgaagagaatacc
cgcatccttgctacaaattcggagttggtgggtgatgtaatccggtcttgtaatgaagaa
acattcctgtcctctgtatccctacagaaaaaaactttagaaataggtaagaaacatggt
gtgacggaggtaaattctgatgtgttgagcaccatatcacgtgcgacacaagaacacttg
cgggaacttgtggaaaagctaactgtgactgcacagcatcgaatgatgatgtacaaggac
aatgaccaatacagcttattaagcgacacccgatcacagctgaagttctttgagcagttg
gatcggctggagaagcagcggaaagatgaggatgagagagaaacaatgctgcgattggca
aagagtcgagccaagcatgaagatccagaacaacttcgattgaaacaaagagccaaagag
atgcaacaattggaacttgcacagttggcacagcgggaagcaaatctcgcagcacttgca
gccattggaccaaggaaaaggaaaaccccagattcaccaagtctcggaacaggaaatgag
ggatttaacagtggtgggaacgcacttggtgttacacggcctcgacccttcctgcgacag
aaagtaacacgagtcaatctcagggatctcctcctctgcctggagcaggaccaagcagct
agtcattccctgctcctgtaccgagcctatctcaaatga
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