Hemitrygon akajei (red stingray): 140727901
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Entry
140727901 CDS
T11019
Name
(RefSeq) histone-binding protein RBBP7
KO
K10752
histone-binding protein RBBP4
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03082
ATP-dependent chromatin remodeling
haka03083
Polycomb repressive complex
haka04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140727901
03083 Polycomb repressive complex
140727901
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
140727901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140727901
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
140727901
Histone modification proteins
HAT complexes
HATB complex
140727901
HDAC complexes
Sin3A-HDAC complex
140727901
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
140727901
PRC2.2
140727901
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
140727901
Heterochromatin formation proteins
Other heterochromatin formation proteins
140727901
Chromatin remodeling factors
NuRD complex
140727901
NuRF complex
140727901
NuRF complex (fruit fly)
140727901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
MIOS_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
140727901
NCBI-ProteinID:
XP_072901941
LinkDB
All DBs
Position
5:complement(78202633..78229446)
Genome browser
AA seq
428 aa
AA seq
DB search
MVRMADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEG
KDYSIHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIE
IKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQK
EGYGLSWNPNLSGHLLSASDDHTICLWDISAGPKEGKIVDAKTIFTGHTAVVEDVSWHLL
HESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPA
SELESQGS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaatggcggataaagaggtttatgacgatgcagtggaggagcgtgtgatcaat
gaagaatataaaatatggaagaagaatactccatttttatatgacctagttatgactcat
gcattagaatggccaagtcttactgtacagtggctacctgatgttaccaggcctgaaggg
aaagattacagtattcaccgtttggtgttagggacacatacgtctgatgaacagaaccat
ttagttattgcaagtgtccagatccccaatgatgacgctcagtttgatgcttctcactat
gatagtgagaagggagaatttggtggatttgggtctgtaagtggaaaaatagaaatagaa
attaagatcaatcatgaaggtgaagtgaatagagcacgttatatgccacaaaatccatgc
attattgccaccaaaactccaacctctgatgtgcttgtctttgattacaccaaacatcca
tctaaaccagatccgagtggtgagtgtaatcctgatctgcggctacgtggtcaccaaaaa
gaaggatatggcctctcctggaacccaaatttaagtggacatcttcttagtgcttcagat
gatcacacaatctgtctttgggacatcagcgcaggtccaaaagaaggaaagatagttgat
gctaaaacgatatttacaggtcacactgcagttgtagaagatgtatcctggcatttactg
catgaatccttgtttggatcagtggctgatgaccagaaactaatgatctgggatacgagg
tcaaataatacttcaaagccaagccattctgtggatgcgcatacagctgaagtcaactgc
ttgtctttcaacccatatagtgaatttatcctggcaactggctccgctgacaagacggtg
gcattatgggatcttcgaaatcttaaattaaaacttcattcctttgaatcacacaaggat
gagatcttccaggtccagtggtctccacataatgaaactattcttgcttccagtggtaca
gatcgtcgtctcaatgtttgggatttaagcaaaattggtgaggagcaatcagcggaagat
gcagaagatggacctccagaactactgtttattcatggaggccacactgcaaagatttct
gatttctcctggaatccaaatgaaccatgggtaatctgttctgtttcagaagataatatt
atgcaagtttggcagatggctgagaatatttacaacgatgaggaacctgacacaccagcc
tccgaattagagagtcaaggatcataa
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