Hemitrygon akajei (red stingray): 140727997
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Entry
140727997 CDS
T11019
Name
(RefSeq) cullin-4A-like isoform X1
KO
K10609
cullin 4
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03420
Nucleotide excision repair
haka04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140727997
09124 Replication and repair
03420 Nucleotide excision repair
140727997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
haka04121
]
140727997
03400 DNA repair and recombination proteins [BR:
haka03400
]
140727997
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haka04147
]
140727997
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
140727997
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
140727997
TCR (transcription coupled repair) factors
Cul4-CSA complex
140727997
Exosome [BR:
haka04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140727997
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
SecA_SW
DUF8612
Motif
Other DBs
NCBI-GeneID:
140727997
NCBI-ProteinID:
XP_072902175
LinkDB
All DBs
Position
5:93626078..93699463
Genome browser
AA seq
827 aa
AA seq
DB search
MLRPAAPCDSPPDEQWSADVSGYGLQRKRVRIAEPDQGALRGSSPAKATSMQRLGLAEAG
QGRKRVRPAQAQEEMADDGQRRANFSALPGHVNGLSRVVETGGKPAASRKLLIKNFKDKP
KLPDSYTQDTWQKLHEAVGTIQNSTSIKYNLEELYQAVENLCSYKVSATLYKQLRQVCED
HVKAKIQQFQEDSLDSSLFLKKINKCWQDHCQQMIMIRSIFLFLDRTYVLQSSMLPSIWD
IGLELFRTHIINDKTVQNKTIDGILLLIEKERNGEAVDRSLIRSLLSMLSDLQVYQESFE
QRFLEETNCLYVAEGQRLMQEREVPEYLHHVNKRLEEEMDRVITYLEQSTQKWLVASVEK
HLLGEHLTAILQKGLNQLLDENRTADLTLLYQLFSRVKGGLPVLLQHWNEYIKTIGTTIV
VNPEKDKTMVKELLDFKDKVDHIIEMCFLKNEKFVNTTKEAFETFINKRPNKPAELIAKY
VDSKLRAGNKEATDEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAE
KSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYIQNQNDPSRIDLTVNVLTMGY
WPTYTPMETHLPSEMVKLQEVFKTFYLGKHSGRKLQWQATLGHSVLKADFKEGKKELQVS
LFQTLVLLMFNEHNEFSMEEIKAATGIEDSELRRTLQSLACGKARVLNKVPKGKDVEDGD
KLIFNDEFKHKLFRIKINQIQMKETAEEQTSTTERVFQDRQYQIDAAIVRIMKMRKTLSH
NLLVSELYDQLKFPVKPGDLKKRIESLIDRDYMERNRDNANQYHYVA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggccggcggcgccctgtgacagcccgccagacgagcagtggagcgccgatgtc
agtggctacggactccagaggaagagagtacggatagccgagcccgaccagggggctctc
cgcggctcgtcaccggcgaaggccacctcgatgcagcggctcggccttgccgaggcgggt
cagggcaggaagcgagtgcggccggcccaggcccaagaggagatggcggacgatggacag
cgcagggccaacttctccgcgctgcccgggcacgttaacgggctgagccgtgtcgtcgaa
accggtggcaaaccggccgcctccaggaagctgctcatcaagaacttcaaagataaaccg
aaattgcctgacagctacactcaggacacgtggcagaagcttcatgaagcagttgggacc
attcagaacagcacctcaataaaatacaatttagaagaactttatcaggctgttgagaat
ctgtgttcttataaggtgtcagcaacactatataaacaacttcgacaggtgtgtgaagac
catgtcaaggcaaagattcaacaattccaagaagattcactggatagcagtttgtttttg
aaaaaaattaacaaatgttggcaggatcactgtcagcaaatgataatgatcaggagcatt
ttcctgtttcttgaccgaacttatgtcctccagagttcaatgcttccatctatctgggac
ataggcttggagctgttccgaacccatatcatcaatgacaaaactgtgcagaacaaaacc
attgatggaatccttctattgattgaaaaggaacgaaatggtgaggctgtggacagaagt
ctgatacgaagcttgctgagtatgctttctgatctgcaggtttaccaggaatcattcgaa
caaagatttttggaggagaccaattgtttatatgtagcagaaggacaaagattaatgcaa
gaaagggaggttccagaatatcttcaccatgtaaacaagcgcctagaggaagaaatggac
cgagtaattacatacctggaacaaagcacacagaagtggttggttgccagtgttgagaag
catcttcttggtgagcatctgacagctattcttcaaaaaggtctcaatcaactgcttgat
gaaaatagaactgctgatctcactttactgtatcagctgttcagcagggttaaaggtggt
ttgccggtccttttgcagcactggaatgaatacatcaagaccattggcactacaattgtg
gttaatcctgagaaagacaagacaatggttaaggagctgctagacttcaaagataaagtc
gatcatataatcgaaatgtgctttctaaaaaatgaaaagtttgtcaatacaacgaaagaa
gcatttgagacttttatcaacaaaaggcctaacaagcctgctgagttgatagccaagtat
gttgattccaaattacgagcgggtaacaaagaagcaacagatgaagaactggagagaata
cttgacaaaatcatgatcatatttaggtttattcatggaaaagatgtatttgaggctttc
tataagaaggatttggcaaaacggctactggtgggaaaaagtgcttccgtggacgctgag
aaatcaatgctgtctaaactgaaacacgaatgcggagctgcattcaccagcaagctagaa
gggatgtttaaagacatggaactttcgaaagatattatgatccagtttaagcagtatatc
caaaatcagaatgacccgagtaggatagatcttacagtcaacgttctgacaatgggatat
tggccaacgtacacaccaatggaaacccatctgccttctgagatggtgaaattacaggag
gtatttaagacattctacctcggaaaacacagtgggaggaaactacagtggcaggccaca
ttagggcattcagttttgaaggcagattttaaagagggtaaaaaggaactgcaggtttca
ctcttccagaccttggtgttgctcatgttcaatgagcacaatgagttcagtatggaagaa
atcaaggctgcgactggcatagaagacagtgaattaaggagaacgttgcagtctttagct
tgcggtaaagctcgtgtgttgaacaaagttcccaaggggaaagatgtggaagatggagac
aagcttatctttaatgatgagttcaagcacaaactgtttagaataaagattaaccaaatc
cagatgaaggaaactgctgaggagcagacgagtaccactgaacgagtattccaagataga
cagtaccaaattgatgctgctatagtccgaatcatgaaaatgagaaagacactcagccat
aacctccttgtttcagaactctatgaccagttgaagtttccagtgaagcctggagatctg
aagaagagaattgagtctctaattgatcgggattatatggagaggaaccgagacaatgcc
aaccagtatcattatgtggcataa
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integrated database retrieval system
