Hemitrygon akajei (red stingray): 140728170
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Entry
140728170 CDS
T11019
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
140728170 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140728170 (bard1)
04121 Ubiquitin system [BR:
haka04121
]
140728170 (bard1)
03036 Chromosome and associated proteins [BR:
haka03036
]
140728170 (bard1)
03400 DNA repair and recombination proteins [BR:
haka03400
]
140728170 (bard1)
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
140728170 (bard1)
Ubiquitin system [BR:
haka04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
140728170 (bard1)
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
140728170 (bard1)
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
140728170 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_10
ANK_LRRK2
NIBRIN_BRCT_II
zf-C3HC4_4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
140728170
NCBI-ProteinID:
XP_072902572
LinkDB
All DBs
Position
5:complement(130222242..130473308)
Genome browser
AA seq
801 aa
AA seq
DB search
MMSRPESRPVTGLMLAWPRTAEALAALQRMLQCSSCNNLLQEPVCLGGCEHVFCRVCVAD
SLGNGCPVCHAPAWVRDMQPNRQLHNIVNLCNQLEAVLNNKDLAGDKSNSVTPEMKAERE
TSKKWDLRTWFSPRSGKLKCVLDMHALKKDQKITPSSDLSETSSPVFEFLSSPSPPHDSP
KRRTSDKSKQRVRKRLTDANKEWGFGKRISKKTAREGDSPGTMDHDRVVSFSSQPMVYNF
QDQEVVGEPVEELAHADAASLPNNVIDSNVESATKNLGDDLSDASIKAAASSCKDVSPVQ
VAKVLKKEEHVVPLPTTHAMPKRLRKSSDSNSKTPSKKSKKGPSPCTKILAASCSKNMCE
PTRSDTLQESAVPLLLKSELNEPDNDIQAVSSTESSFNTPSKKGNSERKQHATQKSPHTP
RSTPKSQLAGSHTTPISPLTPLMKRNHKGETPLHIASIKGDVATVEQLLENGANPNIKDN
AGWTPLHEACNHGHVKVVQMLLQFGVLVNTPGYENDSPLHDAVKNGHEDIIKLLVLHGAS
QDVINIFGLRPIDYANTEQLIAALKHSTKDENPVVEQCFAASASQRRDEPIMLLGSGLLP
ADKNKLDRLIRLLKVGNCTEFSTSVTHIIVPSDHAPCTMKCLMGIISGCWFVDLQWVAAC
LECKGRVSEEDYEISSMTGPKRGRLNQEQQLPKLFDGCHFYFMGSFKSCKKEDLAHLVKL
GGGQVLTRQPKPDSDVTQSINTVAYHASPGSDQSFCTQYIIYDKDSNYKPEKMRLGKVWT
THSAWLINCVKSFELLPVTES
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgagacctgagtccaggcccgtaacgggactaatgctggcgtggcctcggact
gccgaggctctggccgcgctgcagcgtatgttgcagtgctcgagttgtaacaatctgctg
caggagccagtctgtcttggaggttgtgagcatgtgttttgccgtgtttgcgttgctgat
tctcttgggaatggctgtccagtatgtcatgctccagcgtgggtgagagatatgcagcca
aatcgacagctgcataatattgtcaacctttgcaaccaacttgaagctgtcctcaataac
aaagacttggcaggtgataaaagtaactcagttacaccggaaatgaaagctgaaagagaa
actagtaaaaagtgggatttaagaacatggtttagtccacgcagtggaaaattgaagtgt
gttctggatatgcatgctttaaagaaggatcagaaaataactccaagctccgacttgagt
gaaacttcctctcctgtatttgaattcttgtcatcgccatctcctccgcatgattctcca
aagaggagaacttcagacaagtcaaaacaaagagttagaaaaagattgactgatgctaat
aaagaatggggttttggaaaaagaataagcaagaaaacagcgagagaaggtgacagccct
ggaacaatggatcatgacagagttgtctcattttccagtcaaccaatggtttataatttt
caggaccaagaagttgtaggtgaacctgttgaagaattggcccatgcagatgcagcttca
ctgcctaacaatgtaattgactcgaatgtagagtctgcaaccaaaaatctgggtgacgat
ctttctgatgcatctatcaaagcagcagcttccagttgcaaagatgtttctccagtacag
gtggccaaagtcttaaagaaggaagagcatgttgttcctttacccacaacacatgccatg
cctaaaagattaagaaagtcatctgattccaactctaaaactccctcaaaaaagagcaag
aaaggtccaagtccttgcactaaaatattggcagcaagttgcagtaagaatatgtgtgaa
ccaactagatcagacacgcttcaggaatctgcagtcccactgctgcttaaatctgagttg
aatgagcctgataatgatatacaagctgtttcttcaacagagagtagcttcaacacacca
tcgaagaaaggtaacagtgagagaaaacagcatgcaacgcaaaaatctcctcatactcca
cgatctacgcctaagagccaactggctggaagtcatacaactccaatctctcctcttact
cccttaatgaagagaaatcacaagggtgagacaccgctgcacattgcttccataaagggt
gacgttgcaacagtggagcagctcttggagaatggagctaatccaaatattaaagacaat
gcaggatggacgccattgcatgaagcctgtaaccatgggcatgtgaaagttgtacagatg
ttactgcagtttggtgttctagtgaatacaccaggatatgaaaatgattctccattgcat
gatgcagtaaagaacggacacgaggatattattaagctgctcgttttacacggagcttct
caagatgtgatcaatatctttggtttgcggccgattgattacgcaaatactgaacaactg
attgccgctctgaagcattccactaaagatgaaaatccagttgttgagcaatgctttgcg
gcatctgcaagccagagaagagatgaacctatcatgttgttgggaagtggactccttcca
gctgacaagaataagctcgacagattaataaggctactgaaagttggaaattgcactgaa
tttagtacttctgtgacgcacattattgttcccagtgatcatgctccctgtaccatgaag
tgtttgatggggattatctctggctgctggtttgtggatttgcagtgggtggcagcttgt
ctggagtgcaagggcagagtttctgaagaagactacgagataagtagcatgactggtccc
aagcgtgggcgtctcaaccaggagcagcagctgccaaagctgtttgatggctgccacttc
tatttcatgggctcattcaaaagctgcaagaaagaggatttggctcacttggtcaagctt
ggtggaggccaggtccttacccggcagcccaagcctgatagtgacgtgactcagagcatc
aatactgtggcctaccatgcatcgccaggttcagatcagtctttctgtacacagtacatc
atatatgacaaagacagtaactacaagcccgagaagatgaggctgggtaaagtgtggact
actcattctgcatggctgattaactgtgtgaaatcatttgaattgcttccagttactgag
agctag
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