Hemitrygon akajei (red stingray): 140728319
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Entry
140728319 CDS
T11019
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haka03016
]
140728319 (lcmt2)
Enzymes [BR:
haka01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
140728319 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
140728319 (lcmt2)
Transfer RNA biogenesis [BR:
haka03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
140728319 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_3
Kelch_6
Kelch_2
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
140728319
NCBI-ProteinID:
XP_072902966
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Position
5:150897718..150935080
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AA seq
696 aa
AA seq
DB search
MSLRDGSEEGHSVSALNKRCRSKKQAGKDAAVQGTNDSSIVSKYSMVNLGYFTDGFLKEF
VHKTNRRAPLINRGYYVRAKAVDYSVRCFLKHTEDYPCRQILSLGAGFDSLYFRLKASGE
LKNVIMYEVDFPDVVQRKATLIKNKQELVELIGCTDEMGLAQMVAGHLYGMDYKLLGIDL
TEITKLDNTLMEIGLNYACPTLLLSEVVLTYMKNESSSAVIRWAAERFSSAVFVVYEQIR
PNDPFGQVMQQHFVQLNSTLHALVQFPGKEAQQIRFLKEGWEECFCIDMNEFYIRCIPEQ
EKQRIELLEPFDEYEEWHLKCSHYMILCASKGDLIKYLPFTPHPDYCTKLDILDSLQLSV
SLCETETQSPHLRRFAHCSVLVGPYTVVTTGGFGNRIGQHGRLKDISLLAKSGPVWKSTS
FRDADGLLTERMFHSMTALSDGRCIIIGGRTSPLKPVTSVLCLRCDTGDGGISNVSLSLK
AIECSGTMLSPRWRHTATEVIYRDQNYLFIYGGRSSKELVLDDWHFLSLQDYSWTNIPVD
GPPPEGRHSHTACTWKGGVVIAGGLGIAQVPLGSVFYLKPTLSGFVWERIQMISSVIPRY
SHTAHILDDKLILLGGVSIHTDSNPEVTLIDLKAGRSCNYYISTNLVKWPLMLHNHSSLL
LAKERQVLVIGGGGNCFSFGTHLNYQPVLLQLPEIC
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcgggatgggagtgaggagggccactcagtcagcgccttaaataagagatgc
aggagtaagaagcaggccgggaaggatgcagctgttcagggtacgaacgacagcagtatt
gtcagcaagtattcaatggtcaatttgggctacttcactgatggattcctgaaagaattt
gtacataaaaccaatagaagagctccactcataaatcgtggctactatgtgagggcaaag
gcagtggattatagtgtgcgttgcttcttaaaacataccgaagattacccttgtagacaa
atcctctcactcggagctggttttgattccttgtacttccggctgaaggcaagtggtgag
ctgaaaaatgtaattatgtatgaggtggattttccagatgtcgttcaacgcaaagccact
ctgattaaaaacaagcaggaacttgtggagcttataggctgcactgacgaaatgggactt
gcccaaatggttgcaggtcatctgtatggtatggattacaagcttctaggtattgatctc
actgaaataactaagttagataacacactgatggaaattggcctaaactatgcttgccca
acgctattgctgtcagaagttgtgctgacatatatgaaaaatgaaagctcttcagctgta
atccgttgggctgcggagcgattttcgtcagcagtgtttgttgtctatgaacagatacgt
ccaaatgatccctttggtcaagtgatgcagcagcactttgtgcagttgaactccactctg
catgcacttgttcagttccctggaaaggaggctcagcagattcgttttttgaaagagggc
tgggaggaatgcttttgtattgacatgaacgaattttatatcagatgtattccagagcaa
gagaagcaaaggatagaactgttggaaccttttgatgagtatgaggaatggcatctgaag
tgctctcactatatgattctgtgtgcatcaaaaggagatttgataaagtatctgccattt
actcctcatccagattactgcaccaagttagatattcttgattcattgcaactttcagtc
tctctatgtgagacagaaacacagagccctcatctgaggagatttgcccattgctctgta
ctagttggcccatatacagttgttaccactggaggatttggcaacagaattggtcagcat
ggacgccttaaagatatatcacttctggctaaaagtgggccagtttggaaatctacctcc
tttagggatgcagatggtttattgactgagcgaatgtttcacagcatgaccgcactcagt
gatggtcgttgtataatcattggcggccgcacatctccactgaagccagtcacaagtgtt
ctttgtttgagatgtgacacaggcgatggtggcatctccaatgtcagcttgtcattaaag
gcgattgaatgcagtggcaccatgctgtcaccacgctggcggcacacagcaacagaagtg
atttacagagaccagaactatctgttcatttatggtggtcgctcatccaaagagttggtt
ctagatgattggcatttcctcagtctgcaagattacagctggacaaatattccagtggat
ggtcctccgcctgaaggccgtcattcccacactgcgtgtacatggaagggtggcgttgtg
attgctggtggattgggaatagcacaagttcctttgggatctgttttctatcttaagcca
actttgtctggttttgtttgggaaagaatacaaatgatttcttctgtcattccgcgatac
tcgcacacagcacatattcttgatgataaacttattttgcttggaggagtatcaatccac
acagattcaaatccggaagtaactcttattgatttaaaagcaggacggagttgtaactac
tacatcagcacgaaccttgtgaagtggccactaatgttacacaatcacagtagtctgctg
ttggcaaaggaacgccaggtgctggtcataggcggaggagggaactgcttctcatttgga
acacacctgaattaccaaccagtcttgttacagttacctgagatttgctga
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