Hemitrygon akajei (red stingray): 140728323
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Entry
140728323 CDS
T11019
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04140
Autophagy - animal
haka04148
Efferocytosis
haka05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140728323 (vps16)
04148 Efferocytosis
140728323 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140728323 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140728323 (vps16)
Membrane trafficking [BR:
haka04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
140728323 (vps16)
Hops complex
140728323 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
140728323
NCBI-ProteinID:
XP_072902976
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Position
5:151057535..151132754
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AA seq
836 aa
AA seq
DB search
MAFVTANWNPLGDVFYRKFDLYSEWMIKDDINNCLIAAAPYGGPIALINESRKERSPSFR
PAMEIYSSSGNRIVSFPWKSGVVVHIGWTTDEDLLCIQDDGTVLIHNIFGTFKRHFSMGN
EVLQNQVMEAKVFHSAYGSGIAILTGAFRFTLATNINDLKLRRLPEIPGLKCPPSCWAVL
MEDRQTKIILANGKDLYVLDNGSCQSVSPPGLGPQVSGFTQIAISFNYKRLALFTDTGSI
WMGSSSLRDTLCVIDTNFQTPPKQFVWCNRPKSTNPTVVGVWDKLLLIAGSSKETIKFYL
DEDVHLVPEIDGVRIISSNSHEFLHEVPPACQDIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQNLLSEAVQQCIEAAGNEYEPEMQKALLRAASFGKCFISNFPPDTFVKMAR
DLRVLNAIRDYTVGIPLSYPQYKQLTIEVLIDRLILRKLYPLAIKICEYMKISELQGASR
ILAHWACYKVQQKEEPDDSIARAINHRLGDTPGISYSEIAAKAYDCGRTELAIKLLEYEP
RSGEQVPLLLKMKRSQLALLKAIESGDTDLVYTVVMHLKSEMNRGDFFMTLQNQPVALSL
YCQFCKHQEPETLKDLFNQDDNHQELGNFYVRSSYCNESTIEGRIATLQSAVDEYNKAKN
EFAAKITEDQIKLLRYQYRLQKETGKSYLDLSLHDTVSRLLLESKLKQAEQLYKDFKIPD
KRFWWLKIAALAEKEDWEELEKFSRSKKSPIGYMPFVEICVKHHNKYEAKKYVAKVSPEQ
KVKGYIMIGDLDQAVEVATERKNESELNNILSKCVSATDQSIVEKINRAKAQLLKK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgtgacagcgaactggaaccctctcggcgacgtgttttacaggaagttcgac
ctgtattctgaatggatgattaaggacgatataaataactgtttaattgcagctgcacca
tatggtggtccgattgcgttgatcaatgaatcccgcaaggaaaggtctccaagtttccgt
cctgctatggaaatatactcctcatcgggaaataggatagtctcctttccatggaagagt
ggtgtagtggttcacattgggtggacgacagatgaggacctactctgtatacaagatgat
gggactgttctaatccacaacatttttggcacatttaagagacactttagcatgggtaat
gaggtgttacagaatcaagttatggaggccaaagttttccattctgcttatggttcggga
atcgctatactgactggggcttttcgtttcacacttgccacaaatataaatgacctcaaa
ctccgacgacttcctgaaattccgggattaaaatgcccaccatcatgctgggctgttttg
atggaagatcgacagactaaaattattctggccaatggaaaggatttgtatgtcttagat
aatggatcctgccaatctgtgagtcctcccggtcttgggcctcaagtatctggatttaca
cagattgcaatttcattcaattataaacggcttgctctgttcacagacactggcagcatt
tggatgggttcttcttctttgagggacacgttgtgtgtgattgacacaaatttccaaacg
ccacctaagcagtttgtttggtgtaacagaccaaaaagcacgaatcctactgttgttggt
gtgtgggataaattacttctcatagctggaagttcaaaggagaccatcaaattttaccta
gatgaagacgttcatttagtacctgagatagatggggttcgtattatcagctctaacagt
catgagtttctacatgaggttccacctgcttgccaagatattttcaaaattgcttcaatg
gcacctggtgcacttctactggaagctcataaagaatatgagaaagagagccagaaagct
gatgaatacttacgagagataaaggaacaaaacctcttgtctgaggctgtacagcaatgt
attgaggcagcaggcaatgagtatgaacctgagatgcagaaagctttgctaagggcagcc
tcttttggtaaatgtttcatcagcaactttcctccggatacatttgtgaagatggctcga
gatctaagggtgttgaacgccattcgtgattatacagttggcattcctctcagttatccc
caatataagcagctaactattgaagtcctaattgacagattaattttacgtaagctgtat
cctcttgcaataaaaatttgtgagtatatgaaaatatcagaattacaaggagcaagtcgg
attttggctcactgggcttgttataaggttcaacagaaggaagagcctgatgatagtatt
gctcgtgcaatcaaccacagacttggggacacccctggcatttcttattccgaaattgct
gccaaagcttatgattgtggcaggacagagctagcaataaaacttctagagtatgagcca
agatctggtgagcaagtacccttgctgttgaagatgaagagaagtcagctggcactactt
aaagcaatagaaagtggagacactgatttagtgtacactgttgtgatgcatctaaaaagt
gagatgaacagaggagatttttttatgactctacagaatcagcctgttgcattgagtctt
tattgtcagttctgtaagcaccaggagccagagaccctcaaggatctgttcaatcaggat
gacaaccatcaagaacttggcaacttttatgtgcgttccagttattgcaatgaatcgacg
attgagggacgcattgccactttgcagagtgctgtggatgaatacaataaagctaagaat
gaatttgctgccaagatcacagaagaccaaattaaattactgcgataccagtatcgtttg
cagaaggagactggtaaatcgtacctggatttgtcgttacacgacactgtttccagactg
ttactggaaagcaagctcaaacaagctgaacagctttacaaagactttaaaattcctgac
aaaaggttttggtggctaaagattgctgcattggcagagaaagaagactgggaggaactt
gaaaaattttccagaagcaagaagtccccaataggttacatgccatttgtagaaatctgt
gtaaagcatcacaacaagtatgaagctaagaagtatgtagcgaaagtcagcccagagcag
aaagtgaaaggatatataatgattggagatctagaccaagctgtggaagttgcaacagaa
cgcaaaaatgaaagcgagttgaacaatattctttccaagtgtgtatcagctactgatcag
tcaattgtggaaaaaattaaccgagcaaaagcacagctattaaagaaataa
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