Hemitrygon akajei (red stingray): 140728348
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Entry
140728348 CDS
T11019
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140728348 (gtf3c3)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
140728348 (gtf3c3)
TFIIIC, fungi type
140728348 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_1
TPR_16
TPR_19
TPR_12
TPR_CcmH_CycH
TPR_11
TPR_9
ANAPC3
TPR_7
ARM_TT21
HAT_Syf1_CNRKL1_C
TPR_4
TPR_EMC2
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
140728348
NCBI-ProteinID:
XP_072903045
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Position
5:154551382..154598316
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AA seq
871 aa
AA seq
DB search
MSGFSPELIDYLEGKISFEEFERLREERKAREREATGGGVTEDEGETTAAEDVDVPSRPS
HSRAKQGADDSEETSDGVSKSVHRVFASMFGDHVSDDDDEEHEQNEQLSAGDVFALEMEL
QREHKKMQRERRPRSKLPKALRGLMGEANIRFARGDREEAVMMCMEIIRQAPLAYEPFST
LAMIYEDQGDMEKSLQFGLIAAHLNPSDPEEWVKLAEMSLEQDNIKQAIFCYSKAIKYDT
TNVRYLWERSSLYEQLGEHKLAMDGYRRILNILPPTDGEHFMQLARDMAKSYYETNDITS
AIGVMEEALSKHQSLVSAEDVNMAAELYLSSKQYDKTLEIITTFTEVVVEKISSKKDHAE
EEITYNCQIPDGVPIDIQVKLMVCLIHLHILQPLELLMTHLMEQNPEDMGDLYLDVAEAF
LEIGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGHMELAAESYAKVVAMAPLHLD
ARISLSTLQQQLGRPEKALEALESMHDAETLTHDANAAQQELKLLLHRSTLLYSQKKLPD
YVDALLAMLAMLLKVAMSRAQVSLVSKSKNGEKHLHLAKDSRDKVSDIDDQEAAYLDVKG
KTSVLNKDDWWNLLLKAIYTLCDLKRFKEAELLVDSSLEYYSFYDDRQKRKELEYFGLSA
AVLDNNFRKAYNYIRVMVMENVNRPQLWNIFNQVTMHSQDLRHHRFCLRLMLKHPDNHAL
CVLNGHNAFVAGSFKHALGQYVQAFRIRPDEPLHSLCVGLTFIHMASQKFVLKRHPLLVQ
GFSFLTRYLELRGPCQEVYYNIGRALHQLGLVHFAIHYYEKALELPPLKLEGIEDDQVDL
RRDIAYNLSLIYQNSGNIDMARKLLYTHCVV
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcttcagtcccgagctcattgactacttagaaggaaaaatctccttcgaggaa
tttgagcggctccgtgaggagagaaaggcgcgggagcgggaagccacaggtggtggggta
actgaagatgaaggagaaaccacagccgcagaagatgttgatgtcccatccaggccctca
cacagtcgagccaaacaaggggcagatgattcagaggaaacctctgatggtgtgagcaag
tctgttcatcgagtttttgcttcaatgtttggtgatcacgtaagtgatgatgatgacgag
gaacatgaacaaaatgaacagctctctgctggagatgtttttgctttggagatggagctg
caacgagaacacaagaaaatgcaaagggagaggcgacctcgaagtaaactccctaaagca
ttgagaggtctcatgggagaagctaatatcaggtttgcacgaggagaccgtgaagaggct
gtgatgatgtgtatggaaatcatcagacaagctcctcttgcttatgagcccttctctacc
cttgcaatgatttatgaagatcaaggagatatggagaaatcattgcaatttggattaatt
gcagctcatttaaatcccagtgatccagaggagtgggtgaaattggctgaaatgtctctt
gagcaagacaatatcaaacaggctattttctgttattctaaagccataaagtatgataca
acaaatgtgcggtacctttgggagcgcagcagcctttatgaacagcttggtgaacacaag
ctggctatggatggatacaggcgaatccttaacattctgccacctactgatggggagcac
ttcatgcagctagccagagacatggcaaaaagttactatgaaactaatgatattacatca
gctattggtgtgatggaagaggctcttagcaaacatcagagcctagtttctgctgaggat
gtgaacatggcagctgaactgtacctctcgagcaaacagtacgataaaacattagagatt
ataactacctttactgaagttgtggttgaaaagatttcttcaaaaaaagatcatgcagag
gaagagattacttacaactgtcagattccagatggagttcctatagatatccaagttaag
ctgatggtgtgcttgatccaccttcatattcttcagccccttgagcttttaatgactcac
ttaatggaacagaatcctgaagacatgggagacctctatttagatgtagccgaagctttc
ctagagattggcgagtataactcggcattgccccttttgagtgcccttgtttgttcagaa
cgatacaaccttgcagtggtctggctccgtcatgcagagtgcttgaaagcattgggacac
atggagctggcagcagagagctatgccaaagtggtggcaatggcacctttgcacctggac
gcacgtatttctctctcaaccttacaacaacaactagggcggccagagaaagctcttgag
gcactggaatcaatgcatgatgctgaaacgttaacacatgatgcgaatgcagctcagcag
gaattgaagctgttacttcaccgttcaaccttactgtattcccaaaaaaagttacctgat
tatgtggatgctttacttgccatgttagcaatgcttttaaaggtggcaatgagcagggct
caagtttctttagtttcaaaatccaaaaatggggaaaaacatctgcatcttgccaaggac
tcaagagataaagttagtgacattgatgatcaggaagctgcatatttggatgtgaaagga
aagactagtgttctgaataaagatgactggtggaatttattgttaaaagccatttacacc
ttgtgtgacctcaaacgtttcaaagaagctgaactcttggttgattcttccttagaatat
tattcattttatgatgataggcagaaacggaaagagttggaatactttggcctgtcagct
gctgttctggacaataacttcaggaaagcatacaattatatcagggtcatggtgatggaa
aatgtgaatagacctcagctatggaatatctttaaccaagttaccatgcattctcaagac
ctgagacaccatcgtttttgtctgcgcttgatgctgaaacacccagacaatcatgccctt
tgtgtgcttaatggacataatgcttttgttgctggaagcttcaagcatgctttaggtcag
tatgttcaggcatttagaattcgacccgatgaacccctgcacagtctctgtgtgggcctt
acttttatccatatggcatctcagaagtttgttttgaaacggcatcctcttttggtgcag
ggattttcctttcttacacgatacttggaactccgaggaccttgccaagaagtgtactat
aacataggacgtgcattacaccaactggggcttgtgcattttgctattcattattatgaa
aaagcactggagctccctcctcttaagttagagggaatagaggatgaccaagtggatctc
agacgagatattgcttataatttatcattaatatatcagaatagtggaaacattgatatg
gctcggaaacttttatatacacattgtgttgtataa
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