Hemitrygon akajei (red stingray): 140728471
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Entry
140728471 CDS
T11019
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04145
Phagosome
haka04814
Motor proteins
haka05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140728471
09142 Cell motility
04814 Motor proteins
140728471
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
140728471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haka03036
]
140728471
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
haka04812
]
140728471
Chromosome and associated proteins [BR:
haka03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
140728471
Cytoskeleton proteins [BR:
haka04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
140728471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_EML
Beta-prop_EML_2
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF4
WD40_like
eIF2A
Beta-prop_WDR11_1st
Draxin
Motif
Other DBs
NCBI-GeneID:
140728471
NCBI-ProteinID:
XP_072903332
LinkDB
All DBs
Position
5:complement(173063859..173170606)
Genome browser
AA seq
664 aa
AA seq
DB search
MASLYFTTDVFLKISDSFVSLATVMSDKDKSELKAELERKKQRLAQIREEKKRKEEERKK
KEADQKKELPQNEETDIEKKRREAEALLQSMGITSEPSVVHPLRVVTADTCLFHYLVPPT
SPPSKSVSTPSEAGSQDSADCTLGPRTFHWDTDPSVLQLQAESDLGRGAIKLEMAKITQV
DFLPREIVTYTKGTQTPVITQKAEAEEEEEEIVPKQVVEPEPVQVQKEEDKEGVPHELTE
EEKQQIIHSDEFLTFFDQSTRIIERALAEHKDLFFDYSGKDLEEKEGELQGGAKLSLNRE
FSDERWSKHRVVTCMDWSPQYPELLVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFH
CQSSVMSASFARFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVV
GSQNAHNLISVSTDGKICSWSLDMLSQPQDSMELMHKQSKAVAATCMSFPLGDVNNFVVG
SEEGSIYTACRHGSKAGISEIFDGHQGPITGIHYHTAAGPADFSHLFVTSSFDWTVKLWT
TKNNKPLYSFEDNADYVYDVMWSPTHPAMFACVDGMGRLDLWNLNNDTEVPTASITVDKN
PALNRVKWTQTGREIAVGNSEGQILIYDVGEQIAVPRSDEWTRFARTLAEINANRADAEE
EIAA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcctcattgtatttcactacagatgtgttcctgaaaatatcagatagttttgtttcc
ttagctacagtcatgtcagacaaagataaaagtgagcttaaagcagaattagagcgtaaa
aaacagcggttggctcaaatcagagaggaaaagaaaaggaaagaagaggagagaaagaaa
aaggaagctgatcagaagaaggaattgccacagaatgaagaaactgatattgagaagaaa
cgaagggaagctgaagccttgctccagagcatgggcattacatctgagccctctgttgtg
catccactacgggtagtaacagcggatacctgtctgtttcactatttagtccctcctacg
tctcctccctcaaaatcggtgagtacaccaagtgaggctggaagccaggattctgctgat
tgcactcttggaccaaggacctttcattgggataccgatccttcagttctgcagcttcaa
gctgaatctgatcttgggcgtggagcaatcaaattggagatggcaaagatcacacaggta
gattttcttccacgggagattgtcacttatacaaagggaacgcaaactccagttattaca
cagaaagctgaagcagaagaggaggaggaggaaattgtacccaagcaagtagttgaacca
gaaccagtacaagtacagaaagaagaagataaagaaggtgtacctcatgaacttacagaa
gaagaaaaacagcagataattcattctgatgaattcctcacattctttgatcagagcact
agaataattgaacgagctcttgcagagcataaagacttgttttttgactacagtggcaag
gatttagaagaaaaagaaggagaactccaaggtggagctaaactatctttaaatagagag
ttttctgatgaacgctggtcaaaacatcgtgttgttacatgcatggactggtcacctcag
tacccagagctccttgttgcttcgtacaacaataatgaggatgctccccatgaaccagat
ggtgtagctcttgtatggaacatgaaatttaagaaaacaactccagagtatgtcttccac
tgccagtcatctgtaatgtcagcttcttttgcacgatttcatccaaatctggttgttgga
ggaacatattctggtcagattgtgctatgggataatcgcagtaacaaaaggacgccagtc
cagagaacaccactctctgctgctgctcatacgcatcctgtctactgtgtgaatgtggtt
ggttctcaaaatgcccataacctgattagtgtttccactgatgggaagatctgttcttgg
agtctggatatgctttcacaaccacaggatagcatggaattgatgcataagcagtcaaag
gcagtagctgctacttgtatgtccttcccattgggtgacgtcaacaattttgtagttggc
agtgaggaaggctctatatacactgcttgccgtcatgggagcaaagctggaattagtgag
atttttgatggtcatcaaggaccaatcacaggtattcattatcacactgcagctggtcca
gctgacttctctcatctttttgtaacctcctcttttgattggacagtcaaattatggaca
accaagaataacaagcctctgtattcctttgaagacaatgctgattatgtttatgatgtt
atgtggtctcccacccatcctgccatgtttgcatgtgttgatggaatgggaagacttgat
ttatggaatctaaataatgatacagaggtaccaacagcaagtataacagtggacaaaaat
cctgcactgaaccgtgtgaaatggactcaaactggaagagaaattgctgtgggtaactca
gaagggcaaatactaatttatgatgtaggagagcaaatagcagttcctcgaagtgatgaa
tggacacgcttcgctcgaactttggcagaaataaatgccaacagagctgatgcagaggaa
gaaattgcagcatga
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