Hemitrygon akajei (red stingray): 140728935
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Entry
140728935 CDS
T11019
Symbol
neil3
Name
(RefSeq) endonuclease 8-like 3 isoform X1
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
140728935 (neil3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haka03400
]
140728935 (neil3)
Enzymes [BR:
haka01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
140728935 (neil3)
DNA repair and recombination proteins [BR:
haka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
140728935 (neil3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Fapy_DNA_glyco
Zn_ribbon_RanBP
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
140728935
NCBI-ProteinID:
XP_072904146
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All DBs
Position
6:29945234..29993183
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AA seq
592 aa
AA seq
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MVEGPGCALNGERIRSRVRTGQRLVGLRGSAVTQLSGRNDSCLQAIELLKGKIYTGVKTL
GKELFIYFEKTELRIHFGMNGSMRINSSERKHSSGAPAVLEIQLTSDFICFFESTFDIRS
TSECEEKVKMMEELDICSVKFSCSRAEEELKRHGPRMICDVLLDQAVLPGVGNIIKNESI
FDSCLHPAIKICQLSAEQIRHLVRVTRDFTILFCTCRKIGSALYKHFRVYKRSTCRQCNG
KIIVCRLGENNRMTYFCSHCQTEDPSQVNNGNFPKRNSLMSWTQGSRDQSIDDTIAKKEE
EEWTCPLCTLVNAPSSKSCDACLTQRLVKAASPQKSGFDTNLIKYQCNSFGKPLIEWKLN
RKAAFGTTTLVLTSQRSSQKSPTFSFSADNEVKGNPLLTDGNPSPALFKKCPASALNSNI
LIKSSFNNYVDQPTNNSTLFSYTNQSLFCHPPKRLKKDHSSFDSNTNTAVSVFRDSNNVD
GDNSPPSSPKFPCCQKHGRPCTLRVVKKEGNNKGRQFYACSMAQAQQCDYFQWADLHFPI
CNHGRRCIMRTVLKLGPNNGRNFYVCSQSMDKQCNFFQWAESGPGIKSTPDY
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggggcccgggtgcgcgctgaatggggagaggatccggagccgtgtccggacg
gggcagcggctggtggggctgcgagggagcgcggttactcagctaagtggacggaatgat
tcttgtttgcaagcaatcgaattgctgaaaggcaagatttacacgggtgtgaagacattg
ggaaaggaactgttcatatattttgagaaaactgaattaaggatacattttggaatgaat
ggttcaatgcgcatcaattcatctgagagaaaacacagcagtggagccccagcagtctta
gagattcagctaaccagtgattttatttgtttctttgagtccacgttcgatatcaggagt
acttcagaatgtgaggagaaagtaaaaatgatggaagaactggatatttgctcggtaaaa
tttagttgctcccgagctgaggaagagctaaagcgacatggtccccgcatgatatgtgac
gttctgttggaccaggctgtgctgccaggagtaggaaatatcatcaaaaatgaatcaata
tttgacagttgccttcatcctgctataaagatttgtcagttatcagctgagcaaatacgt
caccttgtaagagtaactcgagacttcacaattctcttttgtacgtgtcggaagattggg
tcagccttgtataaacacttcagagtttacaagcgttccacgtgcagacagtgcaatggt
aaaattattgtctgccgccttggtgagaataatcgaatgacgtatttctgctcgcactgt
cagacggaagatcccagccaagttaacaatggtaatttccctaaacggaatagcctgatg
agttggacccagggctctcgagatcagtctattgatgataccattgccaagaaagaagaa
gaggaatggacatgtccactttgcactttagtaaatgcaccatcatccaaatcatgcgat
gcctgtttgacacagaggcttgtcaaggcagcatcacctcagaagtctggttttgatact
aatctcataaagtaccaatgtaatagttttggtaaacccctaatagaatggaagctcaat
cggaaagcagcatttggtacaactacgctggttctcacgtcacaaaggagttctcaaaag
agtcctacattcagtttctctgcagacaatgaagtgaaagggaaccccttattaacagat
gggaatccttctccagccttatttaagaaatgtcctgcaagtgcattgaactctaacatt
ttgataaaaagcagctttaataattatgtagatcaaccaaccaataactcaacgttattt
agttacaccaaccaaagtttattttgtcaccctcctaaaagactgaagaaggaccatagt
tcttttgattccaacacaaatactgcagtttctgtcttcagggactctaataatgtcgat
ggtgataatagtcctccttcaagtcctaaattcccatgttgtcaaaaacacggccgtccc
tgtacactgagagtagtcaaaaaagaaggtaacaacaaggggaggcaattctatgcttgc
tcaatggctcaagctcaacagtgtgattactttcagtgggctgatttgcattttccaatc
tgcaatcatggaaggcgatgtatcatgaggacagtactgaaacttggtcctaataatgga
cgcaacttttacgtgtgttcacaaagcatggacaaacagtgtaatttctttcaatgggca
gagagtggaccaggtattaagagcactccagactactga
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