Hemitrygon akajei (red stingray): 140728973
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Entry
140728973 CDS
T11019
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140728973 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
haka04990
]
140728973 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
haka04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
140728973 (pdlim3b)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
140728973
NCBI-ProteinID:
XP_072904255
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All DBs
Position
6:complement(37871085..37935089)
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AA seq
319 aa
AA seq
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MPQNVILTGPGPWGFRLTGGADFNQNLTVSRVTPGSKASLANLSPGDVILAIDGVSTDNM
AHVDAQNRIKAASSKLSLKIDRPETRLWSPQVTEGGKTNPFKINLEAEPQEIKSIGESHN
RKAQPFLAAGNIDDKRQVVSSSYNTPIGLYSTDNIQDALQGQLRGMIIESQEKAEPAPGV
QHSEVYKMLHNNQEESNEPRQSGSFRAIQDYLESEDGGNRPVVTRSVKAPVTKVGTSTGS
VQKLPLCDKCGNGIVGTVVKARDKYRHPECFVCSDCDMNLKQKGYFFIEGQLYCEAHARA
RTKPPEGYDAMSVYPNMRN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaacgtgatcttgacaggtccgggcccttggggtttcaggctgacaggcggc
gctgatttcaaccagaatctgaccgtgtcccgggtaacgcctggaagcaaggcctcgctg
gctaacctttccccaggtgatgtcatcctggctattgacggtgtcagtacggacaacatg
gcacacgtcgatgctcagaataggatcaaggctgcctccagtaaattaagtctgaagatt
gaccgacctgaaaccagactttggtctccacaagtcactgaaggtggcaagacaaatcct
ttcaagattaatttggaggctgaaccacaggaaatcaaatctattggagagtcccataac
agaaaagcccagccatttcttgcagcgggaaacattgatgacaaaaggcaggtagtgagc
tcaagctataacactccaattggcctgtattctactgacaacatacaagatgccctccaa
ggacagctacgaggcatgatcattgaatcacaggagaaagctgaaccagcaccaggagtt
caacactcagaggtttacaaaatgctgcacaacaaccaagaagaaagtaatgaaccaagg
caatctgggtccttccgagcaatccaagattacttggagtcagaggatggtggtaatcgt
cccgtggtcaccagaagtgtgaaggctccagtgacaaaggtgggcacctcaacaggaagt
gttcagaagctgccactctgcgataagtgtgggaatggaatagttgggacagttgtcaaa
gcccgtgacaagtatcgccatcctgagtgttttgtctgctccgactgtgacatgaatctt
aagcagaaaggctactttttcatagaaggacaactttactgcgaagcccatgcaagagca
cgcacaaaaccacccgagggatatgacgccatgtccgtttatccaaatatgagaaattaa
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