Hemitrygon akajei (red stingray): 140729155
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Entry
140729155 CDS
T11019
Name
(RefSeq) DNA topoisomerase 1-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haka03032
]
140729155
Enzymes [BR:
haka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
140729155
DNA replication proteins [BR:
haka03032
]
Eukaryotic type
DNA Topoisomerases
140729155
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
DUF5856
DUF7547
Motif
Other DBs
NCBI-GeneID:
140729155
NCBI-ProteinID:
XP_072904711
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All DBs
Position
1:complement(102043172..102083289)
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AA seq
604 aa
AA seq
DB search
MFRAVSSLTKVAFINFDVRHACLSWSTLRSSISLVRNLHIALKRWEEEIYGDGVKWMFLE
HNGPLFAPEYENLPSGVNFYYDGNQMKLTPAAEEMASFFAKMLDHEYTTKAIFRRNFFED
WQQEMSSSERMTIRDLNKCDFTEIHRYFTEKAEARKGLLKEEKQKLKMEQDAIIEVYGYC
IMDGHRERIANFKIEPPGLFRGRGDHPKMGKLKRRIMPEDVIINCSSDSKIPTPPQGHHW
KEVRFDNKVTWLASWVENVQNLNKYIMLNPSSKLKGEKDLQKYEIARRLKDRINAIRSQY
RVDWKSREMKSRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHDNCDGQ
QCVVEFDFLGKDSIRYYNKVAVEKKVFKNLKLFMDNKDPTDDLFDRLNTSDLNKHLQELM
EGLTAKVFRTCNASVTLQEQLAELTNPEDSVAEKILSYNRANRAVAVLCNHQRAPPKTFE
KTMKNMQAKIEAKMEQLDAAKKDLKSAKVDCKMKKDEKSKHVVEKKKKLVQKLEEQLKKL
EVQATDREENKQIALGTSKLNYLDPRITVAWCKKWNIPIEKIYNKTQREKFAWAIDMTEE
DFEF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagctgtgagctctctgacaaaagttgcctttattaacttcgacgttaggcat
gcttgcttatcttggagcactttaaggagctcaatttctcttgttcggaatttacatatt
gcattgaagaggtgggaagaggaaatctatggagatggtgtaaaatggatgtttctggaa
cataacggtccattatttgcacctgaatatgagaaccttccctcaggtgtcaatttctat
tatgatggcaatcaaatgaagctgactcctgcagcagaagaaatggcctccttctttgcg
aagatgctggatcacgagtacaccacaaaggcaattttcagacgaaacttttttgaggac
tggcagcaggaaatgagcagctcggagaggatgacaatcagagacctaaataaatgtgat
ttcacagaaatccatcgatactttactgaaaaagcagaggccagaaaaggattgctcaag
gaagaaaaacagaaattaaagatggagcaagatgcaatcatcgaggtgtacggctactgt
ataatggatgggcatcgggaaagaatcgcaaacttcaaaatcgagccaccagggcttttt
cgtggccgtggtgatcatccgaagatgggaaaactgaagagaaggatcatgcctgaagat
gtcatcatcaattgtagtagtgattcaaagatcccaacacctccacaaggtcatcattgg
aaggaagtgcgttttgataataaagtaacttggctggcgtcatgggtggaaaatgtccag
aatcttaataaatatatcatgctcaacccaagttccaaactaaagggtgagaaggatctg
cagaaatatgaaattgcccggcgcctgaaggacagaattaatgcaatccgaagtcaatat
cgtgtagattggaaatcaagggaaatgaaatcacgacagagagcagtggcactttatttt
attgacaaattggctttgagagctgggaatgagaaggaagaaggggagactgctgataca
gttggttgctgttcactccgtgttgaacatattaatttgcatgataactgtgatggacag
caatgtgtggtagaatttgacttcctgggaaaagactcgatccgatactacaataaggta
gcagtggagaaaaaggtgttcaagaatctaaagttattcatggacaataaggatcctaca
gatgacttgtttgacagattgaatacctcagacttgaacaagcatcttcaagagttaatg
gagggactcacagccaaagtgtttcggacatgcaatgcctccgttacactgcaagaacaa
ttggcagaactaacaaaccccgaagacagtgttgcagaaaaaatcctgtcctataacaga
gctaacagagcagtggccgttctgtgcaaccaccagagggcacccccgaaaacctttgag
aaaaccatgaaaaatatgcaggccaagattgaagcaaaaatggagcaacttgatgcagct
aagaaagatctgaaaagtgccaaggtggattgcaaaatgaaaaaagatgaaaaatctaaa
catgtggttgaaaagaagaagaaacttgtccaaaagttagaagaacaattgaaaaaattg
gaggttcaagcaacagacagagaggagaacaagcagattgcattgggcacatccaaactg
aactatcttgatcctagaatcacagtggcttggtgcaagaaatggaacattcccattgag
aagatctacaataagacacagagagagaaatttgcctgggctattgatatgactgaggag
gattttgaattctaa
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