Hemitrygon akajei (red stingray): 140729258
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Entry
140729258 CDS
T11019
Name
(RefSeq) acetylcholine receptor subunit beta-like isoform X1
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
140729258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
haka04040
]
140729258
Ion channels [BR:
haka04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
140729258
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF3671
Motif
Other DBs
NCBI-GeneID:
140729258
NCBI-ProteinID:
XP_072904937
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All DBs
Position
6:91113712..91157717
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AA seq
497 aa
AA seq
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MERVRLALGLQVLLLVGAGIGAGASEAEKRLLEQLFSRYNAKVRPAETADEKVTVRVGMT
LSQLISVNEKVEEMTTNVFMNMAWTDYRLRWNPSDFDGILILRIPSSKVWLPDIVLINNN
DGKFNVALYVNVLVQHTGTVSWLPPAIYRSSCSIRVQYFPFDWQNCTMVFKSYTYDVTEV
SLQHALDDKGEREIREVIIDKNAFTENGEWQIQHKPSRKNTLSHDSSYEDITFYLIIQRK
PLFYIVNIIIPCILISILAILVFYLPPDAGEKMTLSISVLLSLTVFLLLLADKVPETSLG
VPIIVKYLMFTMILVTFSVILSVVVLNLHHRSPSTHAMPGWVRQIFIQTLPRYLWIQRPK
AEPTVGEKPLILSRAADEYFIRKPNIDFVCPKENNRTVRQPERLFSEMNWYMNGVAPQTA
LPPDLKAAVDAIKYIANELKAQEEYDELKKDWQYVAMVVDRIFLFVFISFTSIGTLSIFL
DASYNVPPVDPFFDPFS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggaacgggtgaggttggcgctgggtcttcaggttctgctccttgtgggggcaggcata
ggggcgggggcatcggaggcggagaagaggctcctcgagcagctcttcagcaggtacaac
gccaaggtgcgcccggcggaaacagcagatgagaaggtgacggtgagggtggggatgacc
ctctcccagctgatcagtgtgaatgagaaagtcgaggaaatgacaacaaacgtcttcatg
aatatggcttggacggactatcggctgaggtggaatccttcggattttgacggtatcctg
attctccgcatcccctcctcaaaagtctggcttccggacatcgtcctcatcaacaacaac
gatgggaagttcaacgtggcactgtacgtcaacgtcctggtccagcacacgggcacggtc
agctggctgcccccggccatctaccgcagctcctgcagcatcagggttcagtactttccc
ttcgactggcagaactgcaccatggtgttcaagtcgtacacatacgatgtgaccgaggtc
agcctgcaacacgcgctggacgacaagggcgagcgggagatcagggaggtgatcatcgac
aagaatgccttcactgagaacggcgagtggcagatccagcacaaaccctcgcgcaagaac
accctcagccacgacagcagctacgaggacatcaccttctacctgatcatccagcggaaa
cccctcttctacatcgtcaacatcatcataccctgtatcctcatcagcatcctggccatc
ctcgtcttctacctccctccggacgcaggtgagaagatgaccctgtccatctcggtgttg
ctgtctctcactgtcttcctgctgctgttggccgacaaggtcccggagacctctctcggg
gtccccatcatcgtcaagtacctgatgttcaccatgatcctcgtcaccttctccgtcatc
ctcagtgtggtcgtcctcaacctgcaccatcgctcgcccagtacccacgccatgcccggc
tgggtccgacagattttcatccagaccctgcctcgctacctgtggatccagaggcccaag
gcggagccgaccgtcggcgagaagccgctgatcctcagcagggctgccgatgagtacttc
atccggaaacccaacatcgacttcgtctgcccgaaagagaacaacaggacggtccggcag
ccagaacggctcttctcagagatgaactggtacatgaacggggtggccccgcagacggcc
cttcccccggatctcaaggcagcggtggacgccatcaaatacatcgccaacgaactgaag
gcccaagaggagtatgacgagctgaagaaggactggcagtacgtggcgatggttgtcgac
cgcatcttcctctttgtcttcatcagcttcacctccatcgggacgctcagcatcttcctg
gacgctagctacaacgtcccccctgttgatccattcttcgaccccttctcctga
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