Hemitrygon akajei (red stingray): 140729271
Help
Entry
140729271 CDS
T11019
Symbol
scap
Name
(RefSeq) sterol regulatory element-binding protein cleavage-activating protein isoform X1
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haka04131
]
140729271 (scap)
Membrane trafficking [BR:
haka04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
140729271 (scap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
WD40
Patched
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_Nup120_160
NPC1_MLD
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
140729271
NCBI-ProteinID:
XP_072904956
LinkDB
All DBs
Position
1:complement(105088322..105211799)
Genome browser
AA seq
1327 aa
AA seq
DB search
MTITERLREKISQAFYIHGLLCASYPIPIIFFTAVCILTCCYPLLKLPLPGTGPVEFTTP
VKDYSVPPTEANPGSTEQTDRPDWYFGPPVAYIQQIFVKAIVSPWNKNLIAVDVFRAPLS
KVFQLVEEVRNHVFQDSTGMKSLENICLQVTDLLPGLKKLQNILPEHGCLLISPANFWKN
SRDNFDSDPDIIGTIHQYEPKTLQTSASLKDLLFGVPGKHSGVNLHNRKQVVSYAITVIL
QEYHSRFLKSLRLRLRQLHPGTNSTLREDQIVHVHFKEEIGIAELIPLVTTYIILFAYIY
FSTRKIDMVKSKWGLALAAVATVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLEN
VLVLTKSVVSTPVDLEVKLRIAQGLSNESWSIMKNMATELIIILIGYFTLVPAIQEFCLF
AVVGLVSDFFLQMCFFTTVLSIDIRRMELADLNKRLPAEAMQEISEQMRLPHSKSAPRQK
RFERQPTMQPSAPYTISLQPSSFRNLRLPKRLRVVYFLARTRLAQRIIMAGTVIWIGILV
YTDPAGLGTLLTAQVTEQSPLGENGLASIAVPPGVFPRGDTKDGLPAFPSDVSPALENQS
HDTDQSKNLNPLDASPMIAHENINDDGKEQVHSEAKHLENYFKVEITWGVQDEEMWRKLS
FRHWPTLFSYYNNTLARKYVSILPIIPVSFHLSLQDALDARHPQDAKRYHSMFPADYGET
KNINGDRAKDPNKQHSSSKPHVHLDITLYKVGALGLASGVLLVILLFCLYKVFCPKTYGQ
GGLSHGRRRRGDLPCDDYGYSPPISETLPLILKGHLMDIECLASDGMLLVSSCLSGQIRV
WDAQTGDCLTIISNSRQWKDSNIFHERQESREYISDPENGEDDVYENDYNFPRKLTPTQP
LFTDQPDLSSLIDTNFAERSTVPRQRIISEISQETGYDFGQTYDKAYEDHKMLNVQNLRS
FPSHPATLKSSQTSVSLKSRSWDGCCNHRRRSLGDEPLPVYEKTSPLPMWDGDCESSVWS
LGIQGNLIATGRSNGQLEVWNATDGTLRCSNEDGSSGITALAFITNRIVTARLNGSLDFY
CLDTNKTFNQLQYRGAPNRSNISSWSVFNSNDVIVCQLTHMVHCAHQKPITVLKAAAGRV
VTGSQDHTLRIYRLEDSCCLYTLQGHSGGITAVYIDQTMTLASGGQDGAICLWDVLTGSR
ISHMHGHRGDVVSLICTSSCVISGGLDDIICIWDRSTGIKLYSIQQDVGCGASLGVISDN
LLVTGGQGCVSLWDIGYGDLLQTVYLGKSNELQLVRQLLVLDNAAIVCDFGSELSLVYFP
SVLEKLD
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgaccattactgaaaggctgcgtgaaaagatatcacaggcattctatatccacggactc
ttatgtgcatcttatcccattcccattatctttttcaccgctgtgtgtattttaacatgc
tgttatcccttattgaaactacctctgccgggaacagggccagtagagtttacaacacct
gtaaaggattactctgtgcccccaactgaagcaaatccaggatccactgagcagactgat
agaccagattggtattttggacctccagttgcatatatacaacagatatttgtaaaagcc
atcgtatccccttggaacaaaaacttaattgctgttgatgtattccgtgccccactctca
aaagtgtttcagctagtggaagaagtaagaaatcatgtctttcaagacagtactggcatg
aagagcctagaaaatatctgtctccaggtcactgatctacttccagggttgaagaagtta
cagaatatacttccagaacatggctgcctcctcatttctccagctaacttttggaaaaac
agtcgtgataattttgattcagatccagatattattggcaccatccaccaatatgagcct
aagactctgcaaacatctgcttcactcaaagatttgctgtttggagtacctgggaagcac
agtggcgttaatttgcacaatcgcaaacaggtggtctcctatgccatcactgtcatcctg
caggagtaccactcgagatttctaaagagcctccgcttgaggttaaggcaacttcatcct
ggtactaacagcacattgagggaagatcagatagtccacgtccattttaaggaggaaatt
ggcattgctgagttgattcctctggtcacaacgtacatcattctttttgcatacatttat
ttctctaccaggaaaattgacatggtgaaatcaaaatggggtcttgcacttgcagcagtg
gcaacggttcttagctcccttctcatgtccgttggtctgtgtacactgtttggccttaca
cctactttgaatggaggagagatctttccttaccttgttgtggtcattggtttggagaat
gtccttgttctcaccaagtcagttgtctccacccctgtggatcttgaagtcaaactacga
atagcacaaggtttgagcaatgaaagttggtccataatgaagaacatggctactgaactc
attatcatactaatcggttacttcaccctggttccagctattcaggaattttgcctattt
gccgtggttggactcgtttccgatttctttctgcagatgtgtttctttacaacagtattg
tccatcgatatccgccgcatggagcttgctgacttaaataagcgccttcctgcagaagct
atgcaagaaatctctgaacagatgagactgcctcattccaagtcagctccgaggcagaag
agattcgagcgacagcctacaatgcagccttcagctccttataccatatccctgcaacct
tcttcttttagaaacctacgactaccgaagagactgagagtagtttatttcttagctagg
acacgacttgcacagaggattatcatggcggggactgtcatatggattggcatccttgta
tacactgatcctgctggccttgggacacttctaacagcgcaggtgactgagcagagccct
cttggagagaatggcctggcatccattgcagtaccgccaggtgttttcccaaggggagat
actaaggatggtttgcctgccttcccatcagacgtaagcccagcactggagaaccagtca
catgacacagatcagagcaagaacctaaatcctcttgatgcttcacccatgatcgctcat
gaaaatataaatgatgatggcaaagagcaggtccatagtgaggccaaacacctggaaaat
tatttcaaagtggaaattacatggggagtgcaagatgaggagatgtggcggaagctttct
ttccgacattggccaacgctcttcagttattacaataacactttggccaggaaatatgtc
agtattcttcccatcatcccagtctcctttcatctgagtctacaagatgctctggatgca
agacaccctcaagacgcaaagcgatatcattccatgttcccagcagattatggagagaca
aaaaacatcaatggagacagggcaaaagatccaaataagcagcattcttcctctaagcca
catgttcatttggacatcacactttacaaagttggagcacttgggctggcatctggagtc
ctccttgtaattttgctcttctgcttgtataaagtattctgtccaaaaacttatggccag
ggtggcctttctcatgggagaaggcgacgcggagacctaccctgtgatgactatggttac
tcaccacccatcagtgaaaccttgccactaattttgaagggacatttaatggatattgaa
tgcttggccagtgatgggatgttgttagtcagttcctgcctctctggacagatcagagtg
tgggatgcacagaccggtgattgtctgaccatcatatcaaactcaaggcaatggaaggat
agcaacattttccatgagcgacaagaaagccgggaatatatatcagatcctgaaaatgga
gaagatgatgtatacgaaaatgattacaatttcccgaggaaactgactcctactcaaccc
cttttcactgatcagccagatttatccagtttgatagacaccaactttgcagaaaggtct
acagttccaagacagcgaattatttctgaaatttcacaagaaactgggtatgactttggt
caaacttatgataaagcatatgaggatcataaaatgctgaatgtgcaaaacttgaggagt
tttccatcccacccagcaactttgaagtcttctcaaacatcagtgagtctaaagtcacgg
agctgggatggctgctgcaaccacaggaggaggagtttaggagatgagccattgcctgtg
tacgagaaaacctcacctcttcctatgtgggacggagactgtgaaagctctgtttggagt
ttaggcatacagggtaatctgattgcgacaggaagaagtaatgggcaacttgaggtgtgg
aatgctacagatggaacactacgttgcagtaatgaagacggttcatcagggataacagca
ttggcatttatcacaaacagaattgttacagcaagattgaatggttcattagatttctat
tgtttagacaccaataagacttttaaccagctacaataccgaggagcacccaacaggtct
aacatctcctcatggtcagtttttaacagcaatgatgtcatagtttgtcagctgacccac
atggttcattgtgcacatcaaaagcctattacagtactgaaagcagcagctggccgtgta
gtaactggtagtcaagatcacacgctcagaatctatcggcttgaggactcctgttgcctt
tatacattgcagggtcactcaggagggatcactgcagtttatatagaccagacaatgacg
ctggctagtggaggccaagacggggctatttgtctctgggatgtattaaccggaagtcga
ataagtcacatgcatggtcatcgcggtgatgttgtttctctcatttgtacctcaagttgt
gtgattagtggtggattagatgacattatctgtatatgggatcgcagcactggtatcaaa
ctctactccattcagcaagatgtaggttgcggagctagtctgggggtgatatctgacaac
cttctcgtgactgggggacaaggctgcgtcagcctctgggacattggctacggggacttg
cttcaaactgtctacctgggcaaaagtaatgagctgcagcttgttcgacagctgctggtc
ttggacaatgctgccatcgtgtgtgactttggcagtgaacttagcctcgtttacttccca
tctgtgctggagaaactagactga
DBGET
integrated database retrieval system
