Hemitrygon akajei (red stingray): 140729369
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Entry
140729369 CDS
T11019
Name
(RefSeq) eukaryotic initiation factor 4A-I-like
KO
K03257
translation initiation factor 4A
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haka03019
]
140729369
03012 Translation factors [BR:
haka03012
]
140729369
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
haka04147
]
140729369
Messenger RNA biogenesis [BR:
haka03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140729369
mRNA cycle factors
Stress granule specific factors
140729369
Translation factors [BR:
haka03012
]
Eukaryotic type
Initiation factors
eIF-4
140729369
Exosome [BR:
haka04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140729369
Exosomal proteins of bladder cancer cells
140729369
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
140729369
NCBI-ProteinID:
XP_072905134
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Position
6:103024498..103036574
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AA seq
413 aa
AA seq
DB search
MSRTVMSEDGADYRSNDHGSPDRMEPEGVIESNWTEIVDNFDDMNLRENLLRGIYAYGFE
KPSAIQQRAILPCIREYDVIAQAQSGTGKTATFAISILQQLDVELKETQALVLAPTRELA
LQIQKVIVALGDYMGGTCFSCIGGTSIRSDMQKFQLEAPHIVVGTPGRVFDMMNRQHLST
RYIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPSDVLEVTKKFMRDPIR
ILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKML
ARDFTVSALHGDMDQKERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNR
ENYIHRIGRGGRFGRKGVAINLITEEDRRTLRDIESFYNTTVDEMPMNVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaacggttatgtcagaagacggtgctgactacagatctaacgatcatggctcc
cctgacagaatggaaccagaaggagtcattgagagtaactggactgagattgttgataac
tttgacgacatgaacctacgtgaaaacctccttcgtggaatctatgcatatgggtttgaa
aagccatctgctatccagcagcgagccattcttccctgcatcagggagtatgatgttatt
gcccaggcacaatccgggacgggcaagacagccacgtttgccatttctatcttacagcag
ctcgatgtggaactgaaggagacacaggccttggttttggctccaaccagggagctggct
ctgcagattcagaaggtcatagtggccctaggagactacatgggaggcacttgcttctcc
tgtatcggtggtaccagcatcagatctgacatgcagaagtttcagttggaagcaccccac
attgtcgtggggaccccgggccgtgtgttcgatatgatgaaccgccagcacctttctaca
agatacatcaagatgttcgttttggatgaagctgatgagatgctgagcagagggtttaag
gaccaaatctatgaaatatttcagaaacttaacacctccattcaggtggtattgctatct
gccacaatgccttccgatgtcctggaggtgaccaagaagttcatgcgtgatccgattcgt
atccttgtgaagaaggaggagctcacactggagggtatcaggcagttctacatcaacgtg
gagcgtgaggaatggaaattggacacgctatgtgatctgtatgaaactctcactatcact
caagctgtgatattcatcaacaccaggaggaaagtggattggctcactgaaaaaatgctt
gccagagatttcactgtttctgcattgcatggtgacatggaccaaaaggagagagatctc
attatgcgagagttccgctctggatccagccgtgttctcattactactgacttgctggcc
cgtggtattgatgtgcagcaagtgtccctggttatcaactatgatctaccttcaaaccgt
gagaactatattcacagaattggccgtggaggccgttttgggcgcaaaggtgtcgccatt
aatctaatcactgaggaagacagacggacccttcgtgacattgagtcgttctacaacact
actgtggatgaaatgccaatgaatgtggctgatctgatctga
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