Hemitrygon akajei (red stingray): 140729554
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Entry
140729554 CDS
T11019
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
haka Hemitrygon akajei (red stingray)
Pathway
haka04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
140729554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
haka04040
]
140729554
Ion channels [BR:
haka04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
140729554
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Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
140729554
NCBI-ProteinID:
XP_072905575
LinkDB
All DBs
Position
1:220185951..220719117
Genome browser
AA seq
1463 aa
AA seq
DB search
MGNSFFAALKLRFGERMTESTVKQNLDSEEIEKPSVNCRIINQDMWWGAIGSSFTVFVGG
LLLIVLYRGIRICYTELHRISYSAQDRWKKSKERKSSHASVFTGKHISHPVLQEQKESVT
SQNRKPPSFTLTALSAIPIGPNSLEAVYGNVLVGSIEGTWVVLRTLEVVDLGFNCFFLFY
FGLRFIAADDKLVFWIELNSIVDIFTIPPVVISLYFKRDCIGLRFLRTLRLIQLPEILQY
LRILKKHTKIKLVSLLSVFVGAWLTAAGFIHTIENSGDPWRQENNSHQLTYWQCVYLLLV
TMSTVGFGDLTARTTLGQVFMAFFIILGMVLFASHVPEIIELIGTNRKYTGSYSVVMGKK
HIIVCGHITLSSLHELLKNFNWKEKEESSTIILILEDFNPGLELQALFKRHLLQMQFFQG
SVLKPTDLDRVQLDKANACLILADKNCLNPEAEDSANIMKAIAVKQYSPKIRIIAQVLQY
HSMGYLQNLPSWNLMHRDSVICLNELKMGFIAQNCLLPGFSTLLANLFIKKSQVEHKTGT
WLDIYQEGVSQEIFTEYLSDAFVGMSFPEVCQICYLKLKLLLIAIQYRTGAETVSIVINP
TANILIEEQTLGFFIAKKQSHVQKANYYCNECHSDVHNPRCIGTCTCRKKLSKDKPLDGA
IRVQSFGVLPRQIASTELIDSMLAREKVSLDSTGMFHWCPPRAITEVTLSRAAVSRLQLS
NHVIVCIFSEPKFPAIGLRNFVMPLRASSFTYKELKAIVFVVSLEYVTKEWETICNFPKV
FILPGSPLCRADLKAANIATCDMTVVISSNRIHFEEKSLEDKECILATLNLKAMLFEKIK
SSNVPATKSVVNFSANTDTCASVDRYHYRVPIITSLVHQSNVYFLDQEDRDDPDTDLYLT
KPYASGCVFAFSILNSLTCMTYFNDNILLLIRTLVTGGSSPELDEQLADEDALRGSINAQ
NNVDQRNRCKLAYITMCDKRFEEFAHGGKYGDLFCKALLQYGMLCFGIFRLQDPAKQSKK
RFVITNPLSSFELTESDFIMCTVPFYDTETITANVTSQMGYLSKFVPLHTVSRQASVDLR
ADYNMYSRDYARLARREEDRKRVGRGGSLKAAKSRKRRYLERSTLRKILNPTIMERASQE
GNRKSLPFITVQHYGRDTNAGKENRSSTEVEVNIVMGEGMESTNPDAESQGAALKTTGAA
VNTVPEINQLPVATTPGPSALPVGTTPGPSAQPVGTTPGPSALPVGTTPGPSAQPVGTTP
GPSALPVGTTSGPSAQPVGTTPGPSAQPVGTTPGPSAQPVGTTPGPSAQPVGTTPGPSAQ
PVGTTPGPSAQPVGTTPGPSAQPVGTTPGPSAQPVGTTPGPSAQPVGTTPGPSAQPVGTT
PGPSAQPVGTTPGPSAQPVGTTPGPSAQPVGTTPGPRAQPVGTTPGPSAQPVGTTPGPSA
LPAQHPDPEHNLWAQHPDPEHNL
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggggaattcgttctttgctgctctcaaactgaggtttggtgagcgcatgacagaatcc
actgtaaaacagaatctagactctgaagagatagagaagccaagtgtcaactgtcggatc
ataaatcaggacatgtggtggggggcaatcgggtcctcattcacggtgtttgtcggcggt
ctcttgcttatagtgctgtacagaggcattaggatctgctacactgaactgcacagaatc
tcctacagtgcacaagacaggtggaagaagagtaaggagcgtaagagttcccatgcgtct
gtcttcactggaaagcacatcagtcatccagtcctgcaggagcaaaaggagtcagtaaca
tcacagaacagaaaacccccctcctttacgctgactgctctcagtgcaattccgatcggc
ccgaacagtctggaagccgtctatggaaacgttttggtcggatccattgaaggcacttgg
gtagtcctgaggacactggaggtagtcgacctgggatttaattgtttctttctcttctac
tttggcctacgtttcatcgccgccgacgacaagctcgttttctggatagagctgaactct
attgtggatattttcaccatcccccccgtcgttatctctctctacttcaagcgtgactgt
atcggtctgaggttcctgaggacgctccgtctaattcagttacctgaaatcctgcaatac
ctacggatcctcaagaagcacaccaaaatcaaactcgtgagtctgctgtcggtgtttgtg
ggagcctggctgacggctgctggcttcatccacacaattgagaattccggagatccctgg
aggcaggagaacaacagccaccagctgacctactggcaatgcgtctacctactcctggtc
accatgtcgaccgtcggctttggtgacctgactgccaggaccaccctcggccaggtcttc
atggccttcttcatcatcctgggcatggtgttgtttgcaagtcatgtccctgagatcatt
gagctcatcggaaccaatcgcaagtacacaggatcgtacagcgtagtcatggggaagaag
cacattatagtgtgtggccacatcaccctcagcagtcttcacgagttgctgaaaaacttc
aactggaaagagaaggaggagagttcaacaatcattctgatcctcgaggactttaatcct
ggtctggagctccaggccctgttcaaacgccacctgctacagatgcagtttttccaggga
tcggttttgaagccgacagatttggacagggttcagctggacaaagccaacgcctgtctg
attttagccgacaagaattgcctcaaccctgaagctgaagattctgcaaacatcatgaag
gccattgctgtgaaacagtactcgcccaagattcggatcatcgctcaagtgcttcagtac
cacagcatggggtacctgcagaacctgccgagctggaacctgatgcaccgggacagtgtg
atctgcctgaatgagctgaagatgggcttcattgcacagaactgcctcttgccgggcttt
tccactctgctcgccaacctgttcatcaagaaatcccaggtggagcataagacgggaacc
tggctggatatctaccaagaaggagtcagccaagagattttcacggaatatctgtcggac
gcctttgtggggatgtcatttcctgaagtgtgccagatttgctacctcaaactgaagctg
ttgctcatcgccattcagtaccgaacaggtgcagaaacggtcagtatcgtgataaaccca
acagccaacatcctgatcgaggaacaaaccctcggcttcttcatcgccaagaagcaaagc
cacgtacagaaggcaaactactactgcaacgagtgtcacagtgacgtccacaacccccgg
tgcatcgggacgtgtacctgccgcaagaagttgagcaaggacaaaccgcttgatggtgcc
attcgagtgcagtcgttcggggttctgcccaggcaaatagcctcgaccgaattaatcgat
tctatgttggccagggagaaggtgagcctggattccactggaatgttccactggtgtccg
cccagggctatcacggaggtgaccctgagccgtgccgcggtatcgcgcctgcagctgtcg
aaccacgtcatcgtctgcatcttcagcgagcccaagttccctgcgatcggcctgcgcaac
tttgtgatgcctctgcgtgccagcagcttcacctacaaggagctcaaggctatcgtgttc
gtggtgtccctggagtatgtcaccaaggaatgggaaaccatctgtaactttcccaaggtc
ttcatccttccgggatcgccgctctgtcgagctgacctgaaggcagccaacatcgctacc
tgtgacatgactgtggtcatctcctccaatcggatccacttcgaagagaagagcctggag
gacaaagagtgtatcctggccaccctcaacctaaaggccatgctctttgagaagatcaag
agctccaacgtcccagcgacaaagtccgtagtaaacttctcggccaatacggatacgtgt
gcctcagttgacagatatcattacagagtccctatcattacttcactcgttcaccaatcg
aacgtctactttctggaccaggaagaccgagatgacccagacaccgatctgtatctcacc
aagccttacgccagtggatgtgtgtttgccttcagcatcctgaactctctgacgtgcatg
acgtacttcaatgataatattctgctcctgatccgtaccctggtgacaggaggctcctcc
ccagagcttgacgagcagctggctgatgaggacgcactgaggggcagcatcaacgcccag
aacaacgtggaccagaggaatcgatgcaagctggcgtatatcaccatgtgtgacaagcgc
tttgaggagtttgcgcatggcggaaagtacggcgatctgttctgcaaagctctgctccag
tacgggatgctttgctttggtatatttcgactgcaagacccagccaaacagtcaaagaag
cggtttgtcattacaaatcctttgtcctcctttgagctgaccgagtcggacttcatcatg
tgtactgtgcccttctacgacacagagaccataaccgccaacgtcacttcccaaatgggc
tacctgtccaagtttgttccgcttcacacagtgtccagacaggcctccgttgacctaagg
gctgactacaatatgtatagccgtgactatgccaggctggcaaggcgggaagaggacagg
aagcgagtggggaggggaggttccctcaaggctgcaaagtccaggaagcggaggtacttg
gagcgctcgacactgaggaaaatactgaatcccaccattatggaaagggcttcccaggag
gggaacaggaagtccttgcccttcattacagtccagcactacgggagagacacaaatgcc
ggcaaggaaaatagatcttccactgaggttgaagtcaatattgtaatgggtgaagggatg
gagtccacaaatcctgatgctgagagtcaaggtgcagctctgaaaaccactggggcagct
gtgaatacagttccagaaatcaaccagctgcctgtagccacaacacccggacccagcgca
ctgcctgtaggcacaacacccggacccagtgcacagcctgtaggcacaacacctggaccc
agcgcactgcctgtaggcacaacacccgggcccagtgcacagcctgtaggcaccacacct
ggacccagcgcactgcctgtaggcacaacatccggacccagtgcacagcctgtaggcaca
acacccggacccagtgcacagcctgtaggcacaacacccggacccagtgcacagcctgta
ggcaccacacccggacccagtgcacagcctgtaggcacaacacccggacccagtgcacag
cctgtaggcacaacacccggacccagtgcacagcctgtaggcacaacacctggacccagt
gcacagcctgtaggcaccacacccggacccagtgcacagcctgtaggcacaacacccggg
cccagtgcacagcctgtaggcacaacacccggacccagtgcacagcctgtaggcacaaca
cctggacccagtgcacagcctgtaggcacaacacccggacccagtgcacagcctgtaggc
acaacacctgggcccagtgcacagcctgtaggcacaacacccggacccagagcacaacct
gtaggcacaacacctgggcccagtgcacagcctgtaggcaccacacccggacccagtgca
ctgcctgcacaacacccggacccagagcacaacctgtgggcacaacacccggacccagag
cacaacctgtag
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