Hemitrygon akajei (red stingray): 140729762
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Entry
140729762 CDS
T11019
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haka03021
]
140729762 (ctr9)
Transcription machinery [BR:
haka03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
140729762 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_8
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ANAPC3
TPR_9
ARM_TT21_4th
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
140729762
NCBI-ProteinID:
XP_072906056
LinkDB
All DBs
Position
6:complement(185213594..185318542)
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AA seq
1166 aa
AA seq
DB search
MLSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWMALALEYFKQGKTED
FVKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTM
ADKIIMYDQNHLLGRACFCLLEGDKMDQAEAQFNFVLNQSPSNIPALLGKACISFNKKDY
RGALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALDLNPKCVGALVGLA
VLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNT
EVEAMQAESCYQLARSFHVQGDYDQAFQYYYQATQFASTTFVLPFFGLGQMYIYRGDKEN
AAQCFEKVLKAYPNNYETMKILGSLYATSEEQEKREVAKGHLKKVTEQYPDDVEAWIELA
QILEQSDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLE
RAKAEAEHDEHYYNAISVTTSYNLARLHEALCEYHEAEILYKNVLREHPNYVDCYLRLGC
MARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQN
DTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAH
KGYVREARDVFAQVREATAEISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQSTEV
LLFLARAYFKCGKLQDCKQTLLKARHASPNDTVLMFNMALVLQRLATSVLRDEKSNLKAV
LNAVKELELAHRYFKYLSNAGDKMRFDLAQAAAEARQCSDLMSQAQYHVARARKQDEEER
ELRCKQEQQKEMLRMQIVKEQEDKKQKELNEQRKLLEQRSQFLEKTRNLLVFNEDMETKE
KKKGGGGGGKRAKKGEFDEFVNDDSDEDLPLPKKKRKQRASGSEPEGGDENGDRKQKKKK
RRRSQKPAEDGSDDEEPASRPKKPRRPKTVERKKKEKLKPERLPPSMKGKIKSKAIISSS
DDSSDEGTLKIAEGNARDSGSDEDQAADTRRKRLVSDSESEDGRNQERSENEGGSSPGSR
SERSAAGSDSEPSASGQAASDHSGSSGEEDHGESRPTSRASNDSGRQDSYEEGSVQGLPA
ESDQESNQGDGRHTSVSPSQSDDDSD
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgcggatccatcgagatcccgctgagggacacggatgaggtcatcgaactt
gattttgatcagttaccggagggagatgaagtcatcagtatcctcaaacaggagcacacc
cagcttcacatatggatggccttggcgctggagtacttcaagcaagggaagacagaagat
tttgtcaagctgctggaggctgctcgtatcgatggaaacctggattaccgcgaccatgag
aaggaccagatgacctgtcttgatacactcgctgcctactatgtacagcaagctcggaaa
gaaaagaacaaagatgcaaaaaaagagctcatcacgcaggccaccctgctatacactatg
gccgacaaaatcatcatgtatgaccagaaccacttgctggggagagcgtgcttctgcctg
ctggagggggataaaatggaccaagctgaggcacagttcaattttgtgctgaatcagtca
ccaagtaatatccccgcactcctgggtaaagcttgtatctccttcaacaaaaaagattac
cgtggtgctctggcctattataagaaagctcttcggaccaatcctggatgtccagccgag
gtgcggctgggcatgggccattgctttgtgaagctgagtaagctggagaaggcgcgatta
gcatttggacgagctcttgatctcaaccctaaatgtgtaggagcacttgtgggtctcgca
gtcctggaactgaataataaggaggcagattccattaaaaacggcgtgcagctcctttca
agagcttacacaatcgatcccagcaacccaatggtattaaatcacctggccaatcacttc
ttcttcaaaaaggattacagcaaagtacagcatctggctctccatgcttttcataacact
gaggtggaagctatgcaggctgagagttgctaccagttagccaggtccttccatgtgcag
ggtgattatgatcaggctttccagtactattatcaagctacacagtttgcttccactacc
tttgttctgcccttcttcggcctcgggcaaatgtacatttatcgaggggacaaggaaaat
gctgcacagtgctttgagaaagttctcaaggcctaccccaacaactacgaaactatgaag
attctaggttcactctacgccacctcagaggagcaggagaagagggaagttgcaaagggt
cacctgaagaaagtgactgaacagtacccagatgatgtggaggcctggattgaactggct
cagatcctcgaacagtcagatattcagggtgccctttcagcctatggtacagcaacacgt
atccttcaggagaaagtgcaggctgatgtccctcctgagatcctcaacaacgttggcgca
cttcatttccgactgggaaacttgggagaagcgaagaaatacttcctggcttcactggag
cgagcaaaggctgaagctgagcacgatgagcactattacaatgccatctcagtcaccacc
tcctacaacctggccaggctccatgaggccctctgtgaataccatgaagcagaaatactc
tacaagaatgttttaagggagcatccaaattacgtagactgttacttgcgtttaggctgc
atggcgagagacaagggaaatttttatgaggcctccgactggtttaaagaagctctacaa
attaaccaggatcatccagatgcatggtcactgattggcaatctccacttggccaaacaa
gaatggggaccagggcagaaaaaatttgagcgtatcttaaagcagccatccactcagaat
gacacctactccatgctggccttgggaaatgtttggcttcagaccttgcatcagccaact
agagacagagagaaggagaaacgtcatcaggatcgagcattggcgatctataagcaagtg
ctcaggaatgatcccaagaatctgtatgctgccaatggcataggtgcggtattggcccac
aagggctatgtgcgtgaagctcgcgatgtatttgcacaggtgagagaggcaacagcagaa
atcagtgacgtctggctaaatctggctcatatctacgtggaacagaaacagtacattagt
gctgtgcagatgtatgaaaactgcttgaagaagttttacaaacaccagagtacagaagta
ctgctcttcttagcaagggcttacttcaagtgtggcaaacttcaagactgcaaacagact
ttgctgaaggccagacatgcgtcccctaatgatacggtgctcatgtttaacatggcccta
gtgttacaaagactagctacatcagtcttgcgagatgagaagagcaacctgaaggccgtg
ttgaacgcagtcaaagagctggaacttgcccatcgatacttcaagtatctcagtaatgct
ggtgataagatgcgatttgacttggctcaagcagcggcagaggctaggcagtgctctgat
ctgatgagccaggcgcagtaccatgtagctcgtgcacggaaacaagacgaggaggaacgg
gagctgcggtgcaagcaagagcagcagaaggagatgctgaggatgcagatcgtcaaagaa
caggaagataagaagcaaaaggagctgaacgagcagcggaagttattggagcagcggagc
cagtttttggagaaaactaggaatctgctggtgttcaacgaggatatggagacgaaggag
aagaagaaaggaggtggtggtggaggaaagcgtgcgaagaaaggagagtttgacgaattt
gtgaatgatgattctgatgaagatttgcctctgcccaagaagaagaggaagcagagagca
agtggtagtgaacctgagggtggggacgagaacggtgatcgcaagcaaaagaagaagaaa
aggagacgatcccagaaacctgctgaagatggcagtgatgatgaggaaccggcctcccga
ccaaagaaaccacgccggccaaaaacagtcgaacgcaaaaagaaagagaagctcaaacct
gaacgactcccgccttccatgaagggtaaaatcaagtcgaaagccatcatttcatccagt
gatgattcttctgatgaggggacactgaagatagcagaagggaacgctcgtgacagcggc
tcagatgaggaccaggcggccgacacccgcagaaagcggctggtgtctgacagcgagtcg
gaggacggacgaaaccaggagaggtcagaaaatgaggggggcagtagcccaggctcaagg
agcgagcggtcagctgctggctctgacagcgaaccatcggcaagtgggcaggcagcatcc
gaccattcgggcagctcgggagaggaagatcacggtgagtctcgccccacctcacgagcc
tccaacgactctggccggcaagattcttatgaggaagggtcagtccaggggttgcctgct
gaatcagaccaggaatccaatcagggagatggtcgccatacgtccgtgtcaccgtcacaa
tcagacgatgacagtgactga
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