Hemitrygon akajei (red stingray): 140730081
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Entry
140730081 CDS
T11019
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
haka Hemitrygon akajei (red stingray)
Brite
KEGG Orthology (KO) [BR:
haka00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
haka00535
]
140730081 (col14a1a)
Proteoglycans [BR:
haka00535
]
Extracellular matrix (ECM) proteoglycans
Others
140730081 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
NDNF
VWA_3
Laminin_G_2
nSTAND2
Copine
Motif
Other DBs
NCBI-GeneID:
140730081
NCBI-ProteinID:
XP_072906317
LinkDB
All DBs
Position
1:112702398..112921881
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AA seq
1878 aa
AA seq
DB search
MQVFGHGVGTWFLLGFVALTLNFISKAQGQVASPTRLKFSIMSQDSVRITWKAPRGKFQE
YRLTVTPVVGGKPQMLSIRKGETAAVVEGLLPNQEYVVQLFAINNKKESSPAVGQFTMKA
SRSRGRQGSPSQTKPKKDLDSRGSSKATIEGSQFLCKSPAIADIVILVDGSWSIGRLNFR
LVRLFLENLVSAFNVDSDKTRIGLAQYSGDPRIEWNLNEHSTKEAVLDAVRNLPYKGGNT
LTGLALTYIQENCFKPEAGSRPGVPKIGILITDGKSQDDVFPPAKSLRDAGIELFAIGVK
NADANELKAIASEPDETHVYNVADFNIMNTIIESLTKTVCERVEEQDKEIKEATSAPVAP
TDLVITDVTARSFRVSWSHAPGNVEKYRVVYYSTTGQPEEVVVDGTESTALLQNLMSLTE
YQIAVFAIYTKAASEGLRGAATTLALPAAADLRVYDVTHNSMRVTWRAAESASGYMILYA
ALTGGDTADEKEIKVADFVTDIELEGLTPNTEYTVTVYAMYGEEASDPLTGQETTLPLNP
PKNLQFSEIGHSTGRVSWEAGSRKALGYRVMYVRTDGTMMSEVEVEDTTTFLRNLTSLTE
YTIAVFSIYDEGQSEPLTGSFTTKSVPKPLSLRVSDVSLDKFRVSWKHAAEDVTLYRLAC
APLSGEGAKEFVFSGDTDTVILDDLLPGTEYEVSLSAIYSDEAESEVVTVLETTLQQIVT
TAPTTTTTLPPTTVVVRSGIRNLVLDDETTFSVRVSWEPADSFITKYRVSYISLKGDRAE
EAVSMVMVPGRVNNLVLQPLLSDTAYKVTVTPIYVDGEGTGLTVTGKTLVLSGPANLQVS
EEWYNRFRIRWDPPPSPTMGYRVVYTSASAPGPVLDTFVGDDVNTMLILNLLSGTEYLVK
VFATYSTGSSEPLIGTAKTLYLGVTNLASYDVRMTAMCARWQIHQHATTYRVLIESLQGG
KKEEVIVDGGTSRHCFYDLIPNTKYKISVYAQLQEIEGPAMSILEATIPVPTEPPASPTT
VPLPTIPPAREVCKAAKANLVFLVDGSWSIGDENFVKIIGFLYNTIGALNKIGPDGTQVA
IVQFSDDPRTEFQLNSYNDKERLLQAIQRIRYKGGNTKTGKAIKHARDSVFTVEAGLQRG
IPNVLVVITDGRSQDEVDKISQEMQMDGYSIFAVGVADADYAELISIANKPSNRHAFFVD
DFDAFKKIEDELVTFVCETASATCPKVHIGENNLAGFRMMEMFGLVEKEYASVEGVSLES
GSFNSFPCFRLHRNALVSQPTRNIHPDGLPSDYTISFLFRLLPDTPQEPFALWEILNKQR
EPLVGVILDNGRKALTYFNYDYKDEFQTVTFDDPEVKKIFYGSFHKVHVVITKTHAKLVV
DCKQVGEKAVNAAGNISTNGVEVLGRMVRSRSPRDNSASFQLQGFDISCSTSYANKDKCC
ELPSLRDEGNCPALPHACTCSQDSKGPPGPLGPPGSPGLRGPRGERGEQGQRGPDGQRGE
MGMPGLQGQPGPQGPSGLSIQGPPGSAGEKGEKGQIGPIGHQGLPGPRGLPGRDGPPGQR
GPMGKDGSVGPPGSPGPVGSPGVPGSPGAAGSPGPQGDIGPPGPPGLKGERGPRGDAQSQ
GMVRVIAQQVCEQLIQSHLSRYNSILNHVPSNSVQVRAAPGPPGEPGREGPAGPPGEPGP
QGRPGFPGTSGIPGRPGERGLTGEKGDRGSPGVGKQGQRGPPGAPGPQGEGRTGRQGPPG
LPGQQGSSGRTGPRGPRGPSGPPGYCDASTCAGYNIGGEYSDPTDQDIPVVQLPPNSYRT
YDHYDEQELYMYQGSYPYPNPHSQPSYPELRREEPDHPFEEDGDESEMVEIRSPGVRRSA
RSISKWSSTSSSTTKGSQ
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtctttggacatggtgtggggacgtggtttctcctgggctttgtagctttgaca
ttaaacttcattagcaaggcacagggtcaagttgcctctccaacaagattaaagttttct
ataatgtctcaggacagtgtaaggatcacatggaaagcccctagggggaaatttcaagaa
tacagattaaccgtgacaccagttgtaggtggcaagccccagatgctaagcatacggaag
ggtgagacggcggctgttgtggaaggtctcctcccgaaccaggagtacgttgtacagctg
tttgccatcaacaataaaaaagaaagttcaccagctgtgggccagtttacaatgaaggca
tctcgaagcagaggcaggcaaggctcaccttcacaaacgaaaccaaagaaagatttggat
tctcgaggcagcagtaaagcaactattgaaggctctcagtttctgtgcaagtcacccgct
attgcagatattgtcattctggtggatggctcctggagcattggccgtcttaacttccga
cttgtgcgactgtttttggagaacttggttagtgctttcaatgtagattctgacaaaacc
agaataggactggctcagtacagtggagacccacggatagaatggaacctgaatgaacat
agcacaaaggaggcggtgctggatgctgtccgaaacctgccttacaaaggcgggaacaca
ctcacaggcctcgctttaacttacatccaggagaattgttttaaacccgaggctggatcc
agaccaggagtgccgaagattgggatcttgatcacagatggcaaatcgcaggatgatgtt
tttccgccggctaaaagcttacgggatgctggcatcgagctctttgccataggtgtgaaa
aacgctgatgcaaatgagctgaaggcgatagcctccgagcctgacgagacacacgtttac
aacgtggctgacttcaacatcatgaacacgattattgaaagcctcaccaagacggtgtgt
gaacgtgtggaagaacaggataaagagataaaggaagcaacttcagccccagtggcaccc
acggacctcgtcatcactgatgtcactgctaggagtttccgtgtcagctggtcacatgca
ccggggaacgtggagaaatatcgcgtagtctattactccaccacaggtcagccagaagag
gtggttgtggatgggacagagtctactgctctgctccagaacctgatgtccctgacggag
tatcagatcgcagtgttcgccatttacacaaaggctgcaagtgagggtctccgaggcgca
gcaacgacattggcacttcctgcagccgcagacctgcgcgtatacgacgtgacccacaac
agcatgagagtcacgtggagggctgctgaatctgcttctggttacatgatactttatgcg
gcgctgacagggggagacacagctgatgaaaaggagataaaggtggctgactttgttacg
gatatagaattggaagggttaacgccaaacactgaatataccgtgaccgtatatgccatg
tatggagaagaggcaagcgaccctctgactggacaagaaacaacattgccacttaatcct
cccaagaaccttcagttctccgaaattgggcatagtacaggcagggtcagctgggaagca
ggatcgaggaaagctctgggttaccgtgtcatgtatgtgagaactgatgggactatgatg
agcgaggttgaggttgaagatacgacaacttttttaagaaacctgacatcacttacagag
tacacaatcgcggtgttttcgatctatgatgaggggcagtcagagccactgactggcagc
tttaccacaaagagtgttcccaagccgttgtccttaagggtcagtgatgtttctctggac
aagttcagagttagctggaagcatgctgccgaagatgttaccttgtacagactggcatgc
gctcccttgagtggtgaaggggcaaaagagtttgtcttcagtggggatacagacacagtg
attcttgatgatctactgcctgggacggaatacgaagtgtctctctcagcaatatatagt
gatgaggcggaaagtgaagttgttactgtccttgaaactacacttcagcaaatagtcacg
acagcaccaaccactacaaccactcttcctccaacaacagtagttgtccgatctggaata
aggaacctggtcctggatgacgagaccacattcagtgtccgtgtgtcgtgggagcctgcc
gattcattcatcaccaagtacagagtctcctacatctctcttaaaggagatcgggcggaa
gaagcggtaagcatggtgatggttccagggagggtgaacaatctcgtcctccaacctctg
ctttcggacaccgcatacaaagttacggtaacaccgatttacgtcgatggagaaggcacc
ggtctcacggttacagggaagacattggtactgtccggtcctgcaaacctgcaagtgtca
gaggaatggtacaaccgtttccggatcagatgggaccctccaccatcaccgaccatgggc
taccgagtggtgtacacctcggcatctgctcctgggccggttctagatacctttgttgga
gatgatgtgaacaccatgttgattcttaacctactcagtggaaccgaatacctcgtcaaa
gtgtttgcaacgtactcaacgggttccagtgagccactgataggaacagccaagacacta
tatctcggggtgacaaatcttgcctcgtatgatgttcggatgacagccatgtgcgcccgc
tggcagatacaccaacatgccactacctacagagtgcttatcgaatcactccaaggcgga
aagaaggaagaagtgattgttgatggagggacatctcgtcactgcttttatgatcttatt
ccaaacaccaagtacaagatcagtgtatacgcccagctgcaggagatagagggaccggcc
atgagcatactcgaagcaacaattcctgttccgacggagccaccagcttctccaacaact
gtcccgctgccaaccattccacctgcccgggaggtttgcaaagctgccaaagcaaatcta
gtcttcctcgtggatggctcgtggagcattggggatgagaactttgtcaagatcatcggc
ttcctgtacaacacaattggagctctgaacaagatcggcccggatggaactcaggttgcg
attgttcagttcagtgacgatcccagaacagaatttcaactcaactcgtacaatgataaa
gagaggctcctgcaagctattcaacgcattaggtacaagggcggaaacacaaagacaggt
aaagccataaaacatgccagggattcggtgttcacagtcgaggcaggattgcagagaggc
atccccaatgtcttggtggtcatcacggatggtcgatcccaggatgaagttgacaagatt
tcccaagagatgcagatggatgggtacagtatcttcgcagttggcgtcgctgatgctgat
tacgcagagctgatcagcattgcaaacaaacccagcaacaggcatgccttcttcgtggac
gattttgacgccttcaagaagattgaggacgagcttgtcacctttgtctgtgagacggcc
tctgcaacttgcccgaaggtccacattggagaaaataacctggcaggatttcgaatgatg
gagatgtttgggttggtggagaaggagtatgcctctgtagaaggtgtgtcactggagtcc
ggctcattcaacagcttcccctgtttcaggcttcacagaaatgcccttgtttcacaaccc
acaaggaacattcatccggacgggctgccgtcggattacaccatctccttcctgtttcgc
ctgctgcccgacacgccacaggagccttttgccctctgggagatcttgaacaagcagcgc
gagcccctggttggagtcatcttggacaatggcaggaaagctctcacttactttaactac
gattataaggatgagttccagaccgtcacctttgatgatccagaggtgaagaagattttc
tatggcagttttcataaggtgcacgtggtgatcaccaaaacccatgcaaagctggtggtt
gactgcaagcaagtaggggagaaggcggtcaacgcagcaggaaacatcagcaccaatggg
gtggaagtcctgggacggatggtgcgctccaggagcccgagggacaattctgcatcattc
cagttgcaaggctttgatatttcatgttccacgtcctatgcaaacaaggacaagtgctgc
gaacttccctctctgagagatgaaggcaactgtccagcccttcctcatgcctgcacttgt
tctcaagacagtaaaggaccgcctgggcccttgggtcccccgggcagcccaggtttacga
ggtccaagaggtgagaggggagaacaaggtcaacggggtcctgatggtcagcggggtgag
atgggcatgccaggccttcagggccagcctgggccacagggaccaagtggactttcgatt
caaggtcctccggggagtgctggtgaaaaaggcgagaaagggcagattggtcccatcggt
catcagggtctgccaggtccccgaggcctcccaggacgagatgggccaccaggtcaaagg
ggtcccatgggtaaagatggatctgttgggccaccaggttcacctgggccagtggggagt
ccaggagtcccaggttcccctggagctgcaggaagtcccggtcctcagggcgacatagga
cctcccggtcctcctggtctgaaaggagaaaggggcccaaggggagatgcccaatcacag
ggaatggtccgtgtcattgcccagcaagtgtgtgagcagcttatccagagtcacttatca
cgatacaactccattctcaaccacgtccccagcaactctgtccaagtgcgggcagcgccg
gggcccccaggagagccaggccgcgaggggccagcaggcccaccaggagaaccaggtcct
caaggtcgaccgggattccccggtacatcaggaataccaggccgaccaggggaaagaggt
ctgacaggtgaaaagggagatcggggatctccaggcgtcggtaagcagggccagagagga
cctcccggagcaccaggccctcagggtgagggacggactgggcgccaaggtccaccaggg
cttccaggacaacaaggtagctcgggacgtacaggacccagaggaccaagaggaccatct
gggccaccaggttactgtgacgcctctacctgtgctggctacaatattggaggtgaatac
agtgatccaaccgatcaagacatccctgtagtacaattgcctccaaactcctatcgaacc
tatgaccactatgatgagcaagaactgtacatgtaccaggggtcatacccctacccaaac
ccacactcccagccctcctacccagagcttcgccgtgaggaaccagatcatcctttcgag
gaggacggcgatgaatcggaaatggttgagatccggtcaccaggcgttagacgatctgca
aggagcatttctaaatggagcagcacatcttcaagcacaacaaaggggagccaatag
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